Gm34609 Gene Detail

Summary

• Symbol
  Gm34609
• Name
  predicted gene, 34609

• Feature Type
  lncRNA gene
• IDs
  MGI:5593768
  NCBI Gene: 102637916
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:71913589-71948398 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1199 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593768	lncRNA gene	Chr10:71862812-71948398 (+)
129S1/SvImJ	ENSMUSG00200017868	lncRNA gene	Chr10:68562438-68647235 (+)
A/J	ENSMUSG00195005968	lncRNA gene	Chr10:68875679-68960487 (+)
AKR/J	ENSMUSG00220030751	lncRNA gene	Chr10:68519117-68603937 (+)
BALB/cJ	ENSMUSG00180008094	lncRNA gene	Chr10:68890280-68975081 (+)
C3H/HeJ	ENSMUSG00175012933	lncRNA gene	Chr10:68741415-68826217 (+)
C57BL/6NJ	ENSMUSG00215004125	lncRNA gene	Chr10:68499275-68584074 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028089	lncRNA gene	Chr10:68395117-68489299 (+)
CBA/J	ENSMUSG00210009983	lncRNA gene	Chr10:68605295-68690094 (+)
DBA/2J	ENSMUSG00185020889	lncRNA gene	Chr10:68960285-69045095 (+)
FVB/NJ	ENSMUSG00205007795	lncRNA gene	Chr10:68694560-68779364 (+)
JF1/MsJ	ENSUMUG00000025964	lncRNA gene	Chr10:70094596-70191558 (+)
LP/J	ENSMUSG00230051376	lncRNA gene	Chr10:70730237-70815028 (+)
NOD/ShiLtJ	ENSMUSG00190008137	lncRNA gene	Chr10:68931337-69016142 (+)
NZO/HlLtJ	ENSMUSG00225048578	lncRNA gene	Chr10:75026481-75111276 (+)
PWK/PhJ	ENSLUMG00010008296	lncRNA gene	Chr10:68521133-68618095 (+)
SPRET/EiJ	ENSMSPG00010024852	lncRNA gene	Chr10:70230974-70317561 (+)
WSB/EiJ	ENSIUOG00005035266	lncRNA gene	Chr10:68482178-68568987 (+)

Homology

• Gene Tree
  Gm34609
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm34609
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000112414 (Evidence)
• NCBI Gene
  102637916

Representative Sequences			Length	Strain/Species
genomic	102637916	NCBI Gene Model | MGI Sequence Detail	34810	C57BL/6J
transcript	XR_380568	RefSeq | MGI Sequence Detail	1422	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87