Gm34558 Gene Detail

Summary

• Symbol
  Gm34558
• Name
  predicted gene, 34558

• Feature Type
  lncRNA gene
• IDs
  MGI:5593717
  NCBI Gene: 102637852
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:59335623-59364375 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593717	lncRNA gene	Chr13:59333115-59365032 (-)
129S1/SvImJ	ENSMUSG00200017259	lncRNA gene	Chr13:56242275-56247825 (-)
A/J	ENSMUSG00195044509	lncRNA gene	Chr13:55715475-55721013 (-)
AKR/J	ENSMUSG00220045549	lncRNA gene	Chr13:55261373-55266923 (-)
BALB/cJ	ENSMUSG00180017222	lncRNA gene	Chr13:55970285-55975823 (-)
C3H/HeJ	ENSMUSG00175042218	lncRNA gene	Chr13:55758940-55764491 (-)
C57BL/6NJ	ENSMUSG00215039926	lncRNA gene	Chr13:55766564-55772114 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040542	lncRNA gene	Chr13:56128926-56134462 (-)
CBA/J	ENSMUSG00210042713	lncRNA gene	Chr13:55963810-55969360 (-)
DBA/2J	ENSMUSG00185018004	lncRNA gene	Chr13:56808594-56814143 (-)
FVB/NJ	ENSMUSG00205044254	lncRNA gene	Chr13:55568848-55574387 (-)
JF1/MsJ	ENSUMUG00000034380	lncRNA gene	Chr13:56164122-56169681 (-)
LP/J	ENSMUSG00230034049	lncRNA gene	Chr13:66150870-66156420 (-)
NOD/ShiLtJ	ENSMUSG00190034348	lncRNA gene	Chr13:55819819-55825369 (-)
NZO/HlLtJ	ENSMUSG00225034615	lncRNA gene	Chr13:59862976-59868526 (-)
PWK/PhJ	ENSLUMG00010025374	lncRNA gene	Chr13:55089035-55094594 (-)
SPRET/EiJ	ENSMSPG00010041075	lncRNA gene	Chr13:55468514-55474094 (-)
WSB/EiJ	ENSIUOG00005027161	lncRNA gene	Chr13:55281875-55287425 (-)

Homology

• Gene Tree
  Gm34558
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34558
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000114478 (Evidence)
• NCBI Gene
  102637852

Representative Sequences			Length	Strain/Species
genomic	102637852	NCBI Gene Model | MGI Sequence Detail	28753	C57BL/6J
transcript	XR_382530	RefSeq | MGI Sequence Detail	1386	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69