Gm34549 Gene Detail

Summary

• Symbol
  Gm34549
• Name
  predicted gene, 34549
• Synonyms
  Gm44885

• Feature Type
  lncRNA gene
• IDs
  MGI:5593708
  NCBI Gene: 102637842
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:68137819-68140645 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593708	lncRNA gene	Chr7:68078796-68140650 (+)
129S1/SvImJ	ENSMUSG00200013317	lncRNA gene	Chr7:54793431-54855084 (+)
A/J	ENSMUSG00195013737	lncRNA gene	Chr7:59217977-59279637 (+)
AKR/J	ENSMUSG00220021031	lncRNA gene	Chr7:52718754-52780399 (+)
BALB/cJ	ENSMUSG00180004900	lncRNA gene	Chr7:55927892-55989542 (+)
C3H/HeJ	ENSMUSG00175011567	lncRNA gene	Chr7:56720382-56782033 (+)
C57BL/6NJ	ENSMUSG00215021585	lncRNA gene	Chr7:55856213-55917898 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012211	lncRNA gene	Chr7:59402380-59464694 (+)
CBA/J	ENSMUSG00210019983	lncRNA gene	Chr7:56558827-56620479 (+)
DBA/2J	ENSMUSG00185001233	lncRNA gene	Chr7:60894687-60956309 (+)
FVB/NJ	ENSMUSG00205004526	lncRNA gene	Chr7:56554008-56616977 (+)
JF1/MsJ	ENSUMUG00000010724	lncRNA gene	Chr7:65625757-65688074 (+)
LP/J	ENSMUSG00230022104	lncRNA gene	Chr7:66976624-67039586 (+)
NOD/ShiLtJ	ENSMUSG00190007316	lncRNA gene	Chr7:56667123-56728773 (+)
NZO/HlLtJ	ENSMUSG00225017776	lncRNA gene	Chr7:65264443-65326137 (+)
PWK/PhJ	ENSLUMG00010019082	lncRNA gene	Chr7:55177892-55245516 (+)
SPRET/EiJ	ENSMSPG00010003582	lncRNA gene	Chr7:55553608-55614145 (+)
WSB/EiJ	ENSIUOG00005005518	lncRNA gene	Chr7:57116076-57177738 (+)

Homology

• Gene Tree
  Gm34549
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34549
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  51
• RefSeq
  1

• Ensembl
  ENSMUSG00000108828 (Evidence)
• NCBI Gene
  102637842

Representative Sequences			Length	Strain/Species
genomic	102637842	NCBI Gene Model | MGI Sequence Detail	2827	C57BL/6J
transcript	XR_391569	RefSeq | MGI Sequence Detail	348	C57BL/6J

Other
Accession IDs

MGI:5753461

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55