Gm34426 Gene Detail

Summary

• Symbol
  Gm34426
• Name
  predicted gene, 34426

• Feature Type
  lncRNA gene
• IDs
  MGI:5593585
  NCBI Gene: 102637675
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr17:14389903-14391203 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593585	lncRNA gene	Chr17:14381316-14391215 (+)
129S1/SvImJ	ENSMUSG00200034625	lncRNA gene	Chr17:10033942-10035164 (+)
A/J	ENSMUSG00195039815	lncRNA gene	Chr17:10826846-10828068 (+)
AKR/J	ENSMUSG00220027250	lncRNA gene	Chr17:10474302-10475524 (+)
BALB/cJ	ENSMUSG00180028122	lncRNA gene	Chr17:9965590-9966812 (+)
C3H/HeJ	ENSMUSG00175036054	lncRNA gene	Chr17:9960588-9961810 (+)
C57BL/6NJ	ENSMUSG00215042630	lncRNA gene	Chr17:10127107-10128329 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023235	lncRNA gene	Chr17:10477755-10478960 (+)
CBA/J	ENSMUSG00210041941	lncRNA gene	Chr17:9741551-9742773 (+)
DBA/2J	ENSMUSG00185039687	lncRNA gene	Chr17:11600039-11601261 (+)
FVB/NJ	ENSMUSG00205037103	lncRNA gene	Chr17:10446257-10447479 (+)
JF1/MsJ	ENSUMUG00000039485	lncRNA gene	Chr17:11312258-11313485 (+)
LP/J	ENSMUSG00230027831	lncRNA gene	Chr17:13029096-13030318 (+)
NOD/ShiLtJ	ENSMUSG00190037448	lncRNA gene	Chr17:10205428-10206654 (+)
NZO/HlLtJ	ENSMUSG00225048422	lncRNA gene	Chr17:14951312-14952534 (+)
PWK/PhJ	ENSLUMG00010019575	lncRNA gene	Chr17:9974490-9975704 (+)
SPRET/EiJ	ENSMSPG00010042262	lncRNA gene	Chr17:11223800-11225023 (+)
WSB/EiJ	ENSIUOG00005040268	lncRNA gene	Chr17:10813211-10814433 (+)

Homology

• Gene Tree
  Gm34426
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000120609 (Evidence)
• NCBI Gene
  102637675

Representative Sequences			Length	Strain/Species
genomic	102637675	NCBI Gene Model | MGI Sequence Detail	1301	C57BL/6J
transcript	XR_385407	RefSeq | MGI Sequence Detail	397	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm34426:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr142727	Chr17:14389954-14389965 (+)	57 bp
Tssr142728	Chr17:14389969-14389995 (+)	79 bp