Gm34423 Pseudogene Detail

Summary

• Symbol
  Gm34423
• Name
  predicted gene, 34423
• Synonyms
  Gm37713

• Feature Type
  pseudogene
• IDs
  MGI:5593582
  NCBI Gene: 102637670
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:157448842-157449039 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593582	pseudogene	Chr1:157444441-157449042 (+)
129S1/SvImJ	ENSMUSG00200007055	pseudogene	Chr1:154918744-154918941 (+)
A/J	ENSMUSG00195024426	pseudogene	Chr1:154271484-154271681 (+)
AKR/J	ENSMUSG00220014670	pseudogene	Chr1:154058396-154058593 (+)
BALB/cJ	ENSMUSG00180038992	pseudogene	Chr1:154485100-154485297 (+)
C3H/HeJ	ENSMUSG00175045001	pseudogene	Chr1:154544955-154545152 (+)
C57BL/6NJ	ENSMUSG00215040856	pseudogene	Chr1:154435484-154435681 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009326	pseudogene	Chr1:148275584-148275791 (+)
CAST/EiJ	ENSTCUG00005022029	pseudogene	Chr1:153062354-153062551 (+)
CBA/J	ENSMUSG00210021602	pseudogene	Chr1:154441275-154441472 (+)
DBA/2J	ENSMUSG00185047501	pseudogene	Chr1:158705374-158705571 (+)
FVB/NJ	ENSMUSG00205011132	pseudogene	Chr1:153577223-153577420 (+)
JF1/MsJ	ENSUMUG00000038543	pseudogene	Chr1:157862095-157862292 (+)
LP/J	ENSMUSG00230017207	pseudogene	Chr1:158296981-158297178 (+)
NOD/ShiLtJ	ENSMUSG00190044456	pseudogene	Chr1:154294796-154294993 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010046307	pseudogene	Chr1:153219617-153219814 (+)
SPRET/EiJ	ENSMSPG00010046032	pseudogene	Chr1:156561224-156561421 (+)
WSB/EiJ	ENSIUOG00005016108	pseudogene	Chr1:153879045-153879242 (+)

Homology

• Gene Tree
  Gm34423
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm34423
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102245 (Evidence)
• NCBI Gene
  102637670

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102245	Ensembl Gene Model | MGI Sequence Detail	198	C57BL/6J
transcript	ENSMUST00000191746	Ensembl | MGI Sequence Detail	198	Not Applicable

Other
Accession IDs

MGI:5610941

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;