Gm34370 Gene Detail

Summary

• Symbol
  Gm34370
• Name
  predicted gene, 34370
• Synonyms
  Gm45476

• Feature Type
  lncRNA gene
• IDs
  MGI:5593529
  NCBI Gene: 102637603
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:59872479-59902681 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1333 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593529	lncRNA gene	Chr8:59872340-59906221 (+)
129S1/SvImJ	ENSMUSG00200007431	lncRNA gene	Chr8:54664074-54696271 (+)
A/J	ENSMUSG00195012385	lncRNA gene	Chr8:55056440-55088694 (+)
AKR/J	ENSMUSG00220005739	lncRNA gene	Chr8:54857916-54890300 (+)
BALB/cJ	ENSMUSG00180014325	lncRNA gene	Chr8:54673810-54706195 (+)
C3H/HeJ	ENSMUSG00175007650	lncRNA gene	Chr8:54873973-54906351 (+)
C57BL/6NJ	ENSMUSG00215010860	lncRNA gene	Chr8:54686244-54718449 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006769	lncRNA gene	Chr8:54575793-54607309 (+)
CBA/J	ENSMUSG00210009551	lncRNA gene	Chr8:54761717-54794095 (+)
DBA/2J	ENSMUSG00185023302	lncRNA gene	Chr8:60833111-60865498 (+)
FVB/NJ	ENSMUSG00205011562	lncRNA gene	Chr8:54079925-54112308 (+)
JF1/MsJ	ENSUMUG00000015434	lncRNA gene	Chr8:63194615-63213654 (+)
LP/J	ENSMUSG00230007318	lncRNA gene	Chr8:64491894-64524259 (+)
NOD/ShiLtJ	ENSMUSG00190009802	lncRNA gene	Chr8:54660607-54692845 (+)
NZO/HlLtJ	ENSMUSG00225031417	lncRNA gene	Chr8:67927799-67960181 (+)
PWK/PhJ	ENSLUMG00010013068	lncRNA gene	Chr8:54570784-54589889 (+)
SPRET/EiJ	ENSMSPG00010014607	lncRNA gene	Chr8:55709012-55749258 (+)
WSB/EiJ	ENSIUOG00005017669	lncRNA gene	Chr8:55575889-55608133 (+)

Homology

• Gene Tree
  Gm34370
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34370
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000110381 (Evidence)
• NCBI Gene
  102637603

Representative Sequences			Length	Strain/Species
genomic	102637603	NCBI Gene Model | MGI Sequence Detail	30203	C57BL/6J
transcript	XR_379002	RefSeq | MGI Sequence Detail	1047	C57BL/6J

Other
Accession IDs

MGI:5791312

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm34370:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr77442	Chr8:59872417-59872422 (+)	-59 bp