Gm34368 Gene Detail

Summary

• Symbol
  Gm34368
• Name
  predicted gene, 34368

• Feature Type
  lncRNA gene
• IDs
  MGI:5593527
  NCBI Gene: 102637601
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:35434416-35447079 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  502 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593527	lncRNA gene	Chr8:35434416-35447079 (-)
129S1/SvImJ	ENSMUSG00200007943	lncRNA gene	Chr8:30505927-30518491 (-)
A/J	ENSMUSG00195006421	lncRNA gene	Chr8:31007607-31020180 (-)
AKR/J	ENSMUSG00220006205	lncRNA gene	Chr8:30770382-30782954 (-)
BALB/cJ	ENSMUSG00180003289	lncRNA gene	Chr8:30550963-30563533 (-)
C3H/HeJ	ENSMUSG00175014997	lncRNA gene	Chr8:30713632-30726205 (-)
C57BL/6NJ	ENSMUSG00215009304	lncRNA gene	Chr8:30503230-30515826 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005640	lncRNA gene	Chr8:30687010-30699640 (-)
CBA/J	ENSMUSG00210012768	lncRNA gene	Chr8:30536565-30549138 (-)
DBA/2J	ENSMUSG00185002141	lncRNA gene	Chr8:36462887-36475455 (-)
FVB/NJ	ENSMUSG00205004668	lncRNA gene	Chr8:29769125-29781721 (-)
JF1/MsJ	ENSUMUG00000008446	lncRNA gene	Chr8:38179010-38191622 (-)
LP/J	ENSMUSG00230015420	lncRNA gene	Chr8:40113292-40125856 (-)
NOD/ShiLtJ	ENSMUSG00190016274	lncRNA gene	Chr8:30584743-30597323 (-)
NZO/HlLtJ	ENSMUSG00225015116	lncRNA gene	Chr8:43713417-43725989 (-)
PWK/PhJ	ENSLUMG00010013268	lncRNA gene	Chr8:30402064-30414659 (-)
SPRET/EiJ	ENSMSPG00010004612	lncRNA gene	Chr8:31093044-31105587 (-)
WSB/EiJ	ENSIUOG00005005735	lncRNA gene	Chr8:31339461-31352012 (-)

Homology

• Gene Tree
  Gm34368
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000109717 (Evidence)
• NCBI Gene
  102637601

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109717	Ensembl Gene Model | MGI Sequence Detail	12664	C57BL/6J
transcript	ENSMUST00000336383	Ensembl | MGI Sequence Detail	1256	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm34368:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80927	Chr8:35447052-35447064 (-)	21 bp