Gm34354 Gene Detail

Summary

• Symbol
  Gm34354
• Name
  predicted gene, 34354

• Feature Type
  lncRNA gene
• IDs
  MGI:5593513
  NCBI Gene: 102637583
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:59296626-59351615 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1738 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593513	lncRNA gene	Chr13:59293687-59352141 (+)
129S1/SvImJ	ENSMUSG00200017284	lncRNA gene	Chr13:56176528-56234980 (+)
A/J	ENSMUSG00195044526	lncRNA gene	Chr13:55642455-55708229 (+)
AKR/J	ENSMUSG00220045648	lncRNA gene	Chr13:55195610-55254076 (+)
BALB/cJ	ENSMUSG00180017233	lncRNA gene	Chr13:55897270-55963040 (+)
C3H/HeJ	ENSMUSG00175042432	lncRNA gene	Chr13:55693191-55751645 (+)
C57BL/6NJ	ENSMUSG00215039997	lncRNA gene	Chr13:55700810-55759268 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040646	lncRNA gene	Chr13:56063657-56122210 (+)
CBA/J	ENSMUSG00210042890	lncRNA gene	Chr13:55898059-55956523 (+)
DBA/2J	ENSMUSG00185018078	lncRNA gene	Chr13:56742908-56801423 (+)
FVB/NJ	ENSMUSG00205044282	lncRNA gene	Chr13:55503064-55561576 (+)
JF1/MsJ	ENSUMUG00000034702	lncRNA gene	Chr13:56098608-56157356 (+)
LP/J	ENSMUSG00230034931	lncRNA gene	Chr13:66084696-66143552 (+)
NOD/ShiLtJ	ENSMUSG00190034629	lncRNA gene	Chr13:55754068-55812524 (+)
NZO/HlLtJ	ENSMUSG00225034787	lncRNA gene	Chr13:59797232-59855681 (+)
PWK/PhJ	ENSLUMG00010025438	lncRNA gene	Chr13:55023612-55082257 (+)
SPRET/EiJ	ENSMSPG00010041219	lncRNA gene	Chr13:55388426-55449087 (+)
WSB/EiJ	ENSIUOG00005027245	lncRNA gene	Chr13:55215720-55274551 (+)

Homology

• Gene Tree
  Gm34354
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm34354
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  5

• Ensembl
  ENSMUSG00000114854 (Evidence)
• NCBI Gene
  102637583

Representative Sequences			Length	Strain/Species
genomic	102637583	NCBI Gene Model | MGI Sequence Detail	54990	C57BL/6J
transcript	XR_001780970	RefSeq | MGI Sequence Detail	11339	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69