Gm34331 Gene Detail

Summary

• Symbol
  Gm34331
• Name
  predicted gene, 34331

• Feature Type
  lncRNA gene
• IDs
  MGI:5593490
  NCBI Gene: 102637553
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:89029824-89030775 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593490	lncRNA gene	Chr1:89029824-89031775 (-)
129S1/SvImJ	ENSMUSG00200038968	lncRNA gene	Chr1:86265794-86266448 (-)
A/J	ENSMUSG00195035254	lncRNA gene	Chr1:85826703-85827357 (-)
AKR/J	ENSMUSG00220045490	lncRNA gene	Chr1:85974925-85975579 (-)
BALB/cJ	ENSMUSG00180018195	lncRNA gene	Chr1:86119817-86120629 (-)
C3H/HeJ	ENSMUSG00175001655	lncRNA gene	Chr1:85998367-85999179 (-)
C57BL/6NJ	ENSMUSG00215033416	lncRNA gene	Chr1:85929139-85929951 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008066	lncRNA gene	Chr1:85585740-85586394 (-)
CBA/J	ENSMUSG00210012422	lncRNA gene	Chr1:85843696-85844508 (-)
DBA/2J	ENSMUSG00185017196	lncRNA gene	Chr1:90305225-90305879 (-)
FVB/NJ	ENSMUSG00205044285	lncRNA gene	Chr1:85260647-85261301 (-)
JF1/MsJ	ENSUMUG00000019975	lncRNA gene	Chr1:89080586-89081240 (-)
LP/J	ENSMUSG00230021325	lncRNA gene	Chr1:89602055-89602709 (-)
NOD/ShiLtJ	ENSMUSG00190037793	lncRNA gene	Chr1:85901092-85901746 (-)
NZO/HlLtJ	ENSMUSG00225004310	lncRNA gene	Chr1:93498243-93498897 (-)
PWK/PhJ	ENSLUMG00010048452	lncRNA gene	Chr1:85473358-85474012 (-)
SPRET/EiJ	ENSMSPG00010046535	lncRNA gene	Chr1:87495413-87496067 (-)
WSB/EiJ	ENSIUOG00005042961	lncRNA gene	Chr1:85525889-85526543 (-)

Homology

• Gene Tree
  Gm34331
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  5
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm34331
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  2

• Ensembl
  ENSMUSG00000120521 (Evidence)
• NCBI Gene
  102637553

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120521	Ensembl Gene Model | MGI Sequence Detail	952	C57BL/6J
transcript	ENSMUST00000244061	Ensembl | MGI Sequence Detail	772	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm34331:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr12897	Chr1:89030578-89030597 (-)	187 bp