Gm34319 Gene Detail

Summary

• Symbol
  Gm34319
• Name
  predicted gene, 34319

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5593478
  NCBI Gene: 102637535
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:108585812-108589399 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593478	lncRNA gene	Chr5:108582293-108589399 (+)
129S1/SvImJ	ENSMUSG00200024312	pseudogene	Chr5:102331906-102339032 (+)
A/J	ENSMUSG00195042009	pseudogene	Chr5:101788782-101795916 (+)
AKR/J	ENSMUSG00220051820	pseudogene	Chr5:101339276-101346404 (+)
BALB/cJ	ENSMUSG00180047649	pseudogene	Chr5:101941617-101948751 (+)
C3H/HeJ	ENSMUSG00175048036	pseudogene	Chr5:103991385-103999185 (+)
C57BL/6NJ	ENSMUSG00215038542	pseudogene	Chr5:101985292-101992420 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031929	pseudogene	Chr5:101226607-101233746 (+)
CBA/J	ENSMUSG00210045455	pseudogene	Chr5:102748964-102756763 (+)
DBA/2J	ENSMUSG00185048656	pseudogene	Chr5:105644975-105652104 (+)
FVB/NJ	ENSMUSG00205041472	pseudogene	Chr5:101675592-101683394 (+)
JF1/MsJ	ENSUMUG00000016422	pseudogene	Chr5:108705698-108713480 (+)
LP/J	ENSMUSG00230032660	pseudogene	Chr5:109872953-109880079 (+)
NOD/ShiLtJ	ENSMUSG00190051518	pseudogene	Chr5:101641156-101648290 (+)
NZO/HlLtJ	ENSMUSG00225026515	pseudogene	Chr5:117494807-117501933 (+)
PWK/PhJ	ENSLUMG00010016769	pseudogene	Chr5:100691816-100699610 (+)
SPRET/EiJ	ENSMSPG00010047553	pseudogene	Chr5:103797253-103803145 (+)
WSB/EiJ	ENSIUOG00005043861	pseudogene	Chr5:104370804-104377937 (+)

Homology

• Gene Tree
  Gm34319
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm34319
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  4

• Ensembl
  ENSMUSG00000118523 (Evidence)
• NCBI Gene
  102637535

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118523	Ensembl Gene Model | MGI Sequence Detail	3588	C57BL/6J
transcript	ENSMUST00000238796	Ensembl | MGI Sequence Detail	399	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17