Gm34316 Gene Detail

Summary

• Symbol
  Gm34316
• Name
  predicted gene, 34316

• Feature Type
  lncRNA gene
• IDs
  MGI:5593475
  NCBI Gene: 102637530
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:36453395-36456729 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593475	lncRNA gene	Chr15:36452451-36456742 (-)
129S1/SvImJ	ENSMUSG00200027963	lncRNA gene	Chr15:33473809-33475681 (-)
A/J	ENSMUSG00195036968	lncRNA gene	Chr15:33392307-33394173 (-)
AKR/J	ENSMUSG00220031732	lncRNA gene	Chr15:33306271-33308137 (-)
BALB/cJ	ENSMUSG00180032963	lncRNA gene	Chr15:33354486-33356352 (-)
C3H/HeJ	ENSMUSG00175028067	lncRNA gene	Chr15:33558822-33560688 (-)
C57BL/6NJ	ENSMUSG00215021057	lncRNA gene	Chr15:33366679-33368545 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011221	lncRNA gene	Chr15:33401377-33403254 (-)
CBA/J	ENSMUSG00210018248	lncRNA gene	Chr15:33469293-33471159 (-)
DBA/2J	ENSMUSG00185035281	lncRNA gene	Chr15:33454102-33455968 (-)
FVB/NJ	ENSMUSG00205032043	lncRNA gene	Chr15:33363855-33365721 (-)
JF1/MsJ	ENSUMUG00000037883	lncRNA gene	Chr15:33350012-33351871 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190031949	lncRNA gene	Chr15:33435397-33437263 (-)
NZO/HlLtJ	ENSMUSG00225031954	lncRNA gene	Chr15:37145601-37147467 (-)
PWK/PhJ	ENSLUMG00010033691	lncRNA gene	Chr15:33526504-33528387 (-)
SPRET/EiJ	ENSMSPG00010013991	lncRNA gene	Chr15:34156075-34158247 (-)
WSB/EiJ	ENSIUOG00005032809	lncRNA gene	Chr15:33478802-33480695 (-)

Homology

• Gene Tree
  Gm34316
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34316
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2

• Ensembl
  ENSMUSG00000120582 (Evidence)
• NCBI Gene
  102637530

Representative Sequences			Length	Strain/Species
genomic	102637530	NCBI Gene Model | MGI Sequence Detail	3335	C57BL/6J
transcript	XR_383937	RefSeq | MGI Sequence Detail	1633	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm34316:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134017	Chr15:36455670-36455688 (-)	1,050 bp