Gm34307 Gene Detail

Summary

• Symbol
  Gm34307
• Name
  predicted gene, 34307

• Feature Type
  lncRNA gene
• IDs
  MGI:5593466
  NCBI Gene: 102637520
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:59292073-59293649 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593466	lncRNA gene	Chr13:59291734-59296852 (-)
129S1/SvImJ	ENSMUSG00200017277	lncRNA gene	Chr13:56174912-56176483 (-)
A/J	ENSMUSG00195044465	lncRNA gene	Chr13:55640839-55642410 (-)
AKR/J	ENSMUSG00220045622	lncRNA gene	Chr13:55193994-55195565 (-)
BALB/cJ	ENSMUSG00180017197	lncRNA gene	Chr13:55895654-55897225 (-)
C3H/HeJ	ENSMUSG00175042364	lncRNA gene	Chr13:55691575-55693146 (-)
C57BL/6NJ	ENSMUSG00215039974	lncRNA gene	Chr13:55699194-55700765 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040621	lncRNA gene	Chr13:56062040-56063612 (-)
CBA/J	ENSMUSG00210042853	lncRNA gene	Chr13:55896443-55898014 (-)
DBA/2J	ENSMUSG00185018058	lncRNA gene	Chr13:56741292-56742863 (-)
FVB/NJ	ENSMUSG00205044206	lncRNA gene	Chr13:55501448-55503019 (-)
JF1/MsJ	ENSUMUG00000034589	lncRNA gene	Chr13:56096992-56098563 (-)
LP/J	ENSMUSG00230034157	lncRNA gene	Chr13:66083080-66084651 (-)
NOD/ShiLtJ	ENSMUSG00190034536	lncRNA gene	Chr13:55752452-55754023 (-)
NZO/HlLtJ	ENSMUSG00225034682	lncRNA gene	Chr13:59795616-59797187 (-)
PWK/PhJ	ENSLUMG00010025407	lncRNA gene	Chr13:55021996-55023567 (-)
SPRET/EiJ	ENSMSPG00010041169	lncRNA gene	Chr13:55386810-55388381 (-)
WSB/EiJ	ENSIUOG00005027225	lncRNA gene	Chr13:55214104-55215675 (-)

Homology

• Gene Tree
  Gm34307
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34307
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000114208 (Evidence)
• NCBI Gene
  102637520

Representative Sequences			Length	Strain/Species
genomic	102637520	NCBI Gene Model | MGI Sequence Detail	1577	C57BL/6J
transcript	NR_168643	RefSeq | MGI Sequence Detail	688	ZRU/MplStud

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm34307:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr122863	Chr13:59293638-59293671 (-)	-6 bp