Gm34299 Gene Detail

Summary

• Symbol
  Gm34299
• Name
  predicted gene, 34299

• Feature Type
  lncRNA gene
• IDs
  MGI:5593458
  NCBI Gene: 102637508
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:42398833-42402685 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  239 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593458	lncRNA gene	Chr19:42386083-42403600 (+)
129S1/SvImJ	ENSMUSG00200031107	lncRNA gene	Chr19:39133706-39137559 (+)
A/J	ENSMUSG00195011739	lncRNA gene	Chr19:39234948-39238814 (+)
AKR/J	ENSMUSG00220019251	lncRNA gene	Chr19:39050558-39054410 (+)
BALB/cJ	ENSMUSG00180033323	lncRNA gene	Chr19:39487374-39491241 (+)
C3H/HeJ	ENSMUSG00175042309	lncRNA gene	Chr19:39012687-39016538 (+)
C57BL/6NJ	ENSMUSG00215032017	lncRNA gene	Chr19:39088459-39092311 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015744	lncRNA gene	Chr19:38693240-38697159 (+)
CBA/J	ENSMUSG00210038756	lncRNA gene	Chr19:39094837-39098689 (+)
DBA/2J	ENSMUSG00185034128	lncRNA gene	Chr19:39611154-39615020 (+)
FVB/NJ	ENSMUSG00205007890	lncRNA gene	Chr19:38565562-38569413 (+)
JF1/MsJ	ENSUMUG00000050078	lncRNA gene	Chr19:39777524-39781389 (+)
LP/J	ENSMUSG00230025906	lncRNA gene	Chr19:40403776-40407627 (+)
NOD/ShiLtJ	ENSMUSG00190011199	lncRNA gene	Chr19:38960929-38964797 (+)
NZO/HlLtJ	ENSMUSG00225044693	lncRNA gene	Chr19:43957052-43960912 (+)
PWK/PhJ	ENSLUMG00010001406	lncRNA gene	Chr19:38946404-38950264 (+)
SPRET/EiJ	ENSMSPG00010023061	lncRNA gene	Chr19:38674284-38678087 (+)
WSB/EiJ	ENSIUOG00005039001	lncRNA gene	Chr19:38467984-38471863 (+)

Homology

• Gene Tree
  Gm34299
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  5

• Ensembl
  ENSMUSG00000117728 (Evidence)
• NCBI Gene
  102637508

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117728	Ensembl Gene Model | MGI Sequence Detail	3853	C57BL/6J
transcript	ENSMUST00000235253	Ensembl | MGI Sequence Detail	1574	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;