Gm34276 Gene Detail

Summary

• Symbol
  Gm34276
• Name
  predicted gene, 34276

• Feature Type
  lncRNA gene
• IDs
  MGI:5593435
  NCBI Gene: 102637478
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:44687441-44722119 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1170 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593435	lncRNA gene	Chr13:44517144-44754020 (-)
129S1/SvImJ	ENSMUSG00200036826	lncRNA gene	Chr13:41946214-41977816 (-)
A/J	ENSMUSG00195030001	lncRNA gene	Chr13:41006248-41037848 (-)
AKR/J	ENSMUSG00220009844	lncRNA gene	Chr13:40806580-40837942 (-)
BALB/cJ	ENSMUSG00180008947	lncRNA gene	Chr13:41312869-41344470 (-)
C3H/HeJ	ENSMUSG00175030306	lncRNA gene	Chr13:41277218-41308817 (-)
C57BL/6NJ	ENSMUSG00215006766	lncRNA gene	Chr13:41434488-41465847 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032243	lncRNA gene	Chr13:41338578-41369738 (-)
CBA/J	ENSMUSG00210028766	lncRNA gene	Chr13:41282772-41314366 (-)
DBA/2J	ENSMUSG00185032732	lncRNA gene	Chr13:42089588-42120950 (-)
FVB/NJ	ENSMUSG00205013808	lncRNA gene	Chr13:41034723-41066326 (-)
JF1/MsJ	ENSUMUG00000016737	lncRNA gene	Chr13:41628246-41659436 (-)
LP/J	ENSMUSG00230030811	lncRNA gene	Chr13:51415094-51446692 (-)
NOD/ShiLtJ	ENSMUSG00190012410	lncRNA gene	Chr13:41488530-41519891 (-)
NZO/HlLtJ	ENSMUSG00225036395	lncRNA gene	Chr13:45183225-45214589 (-)
PWK/PhJ	ENSLUMG00010022114	lncRNA gene	Chr13:40470396-40501989 (-)
SPRET/EiJ	ENSMSPG00010031309	lncRNA gene	Chr13:40542960-40574956 (-)
WSB/EiJ	ENSIUOG00005027909	lncRNA gene	Chr13:40617383-40650881 (-)

Homology

• Gene Tree
  Gm34276
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  5
• Genomic Mutations
  1 involving Gm34276
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  143
• RefSeq
  4

• Ensembl
  ENSMUSG00000113977 (Evidence)
• NCBI Gene
  102637478

Representative Sequences			Length	Strain/Species
genomic	102637478	NCBI Gene Model | MGI Sequence Detail	34679	C57BL/6J
transcript	XR_873339	RefSeq | MGI Sequence Detail	701	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9