Gm34272 Pseudogene Detail

Summary

• Symbol
  Gm34272
• Name
  predicted gene, 34272

• Feature Type
  pseudogene
• IDs
  MGI:5593431
  NCBI Gene: 102637470
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:57544588-57544840 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593431	pseudogene	Chr7:57544452-57546161 (+)
129S1/SvImJ	ENSMUSG00200009736	pseudogene	Chr7:45054840-45055092 (+)
A/J	ENSMUSG00195011200	pseudogene	Chr7:49205896-49206148 (+)
AKR/J	ENSMUSG00220011386	pseudogene	Chr7:43501596-43501848 (+)
BALB/cJ	ENSMUSG00180010892	pseudogene	Chr7:46081408-46081660 (+)
C3H/HeJ	ENSMUSG00175003665	pseudogene	Chr7:46555146-46555398 (+)
C57BL/6NJ	ENSMUSG00215002031	pseudogene	Chr7:45877856-45878108 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023406	pseudogene	Chr7:49365429-49365681 (+)
CBA/J	ENSMUSG00210017550	pseudogene	Chr7:46936687-46936939 (+)
DBA/2J	ENSMUSG00185006743	pseudogene	Chr7:50848019-50848271 (+)
FVB/NJ	ENSMUSG00205001427	pseudogene	Chr7:46604334-46604586 (+)
JF1/MsJ	ENSUMUG00000014903	pseudogene	Chr7:55610656-55610908 (+)
LP/J	ENSMUSG00230006475	pseudogene	Chr7:56375025-56375277 (+)
NOD/ShiLtJ	ENSMUSG00190003735	pseudogene	Chr7:46970937-46971189 (+)
NZO/HlLtJ	ENSMUSG00225011107	pseudogene	Chr7:54557138-54557390 (+)
PWK/PhJ	ENSLUMG00010002401	pseudogene	Chr7:45522502-45522754 (+)
SPRET/EiJ	ENSMSPG00010001539	pseudogene	Chr7:45562867-45563119 (+)
WSB/EiJ	ENSIUOG00005005847	pseudogene	Chr7:47194724-47194976 (+)

Homology

• Gene Tree
  Gm34272
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000109475 (Evidence)
• NCBI Gene
  102637470

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109475	Ensembl Gene Model | MGI Sequence Detail	253	C57BL/6J
transcript	ENSMUST00000208886	Ensembl | MGI Sequence Detail	253	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;