Gm34245 Gene Detail

Summary

• Symbol
  Gm34245
• Name
  predicted gene, 34245

• Feature Type
  lncRNA gene
• IDs
  MGI:5593404
  NCBI Gene: 118097969
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:59223254-59226110 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  199 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593404	lncRNA gene	Chr13:59223254-59226413 (-)
129S1/SvImJ	ENSMUSG00200017266	unclassified gene	Chr13:56106067-56108923 (-)
A/J	ENSMUSG00195044416	unclassified gene	Chr13:55582371-55585226 (-)
AKR/J	ENSMUSG00220045585	unclassified gene	Chr13:55125161-55128016 (-)
BALB/cJ	ENSMUSG00180017172	unclassified gene	Chr13:55837187-55840042 (-)
C3H/HeJ	ENSMUSG00175042284	unclassified gene	Chr13:55622735-55625591 (-)
C57BL/6NJ	ENSMUSG00215039950	unclassified gene	Chr13:55630333-55633189 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040575	unclassified gene	Chr13:56004547-56007395 (-)
CBA/J	ENSMUSG00210042765	unclassified gene	Chr13:55827617-55830473 (-)
DBA/2J	ENSMUSG00185018024	unclassified gene	Chr13:56671899-56674754 (-)
FVB/NJ	ENSMUSG00205044127	unclassified gene	Chr13:55443636-55446488 (-)
JF1/MsJ	ENSUMUG00000034339	unclassified gene	Chr13:56038926-56041777 (-)
LP/J	ENSMUSG00230034307	unclassified gene	Chr13:66014066-66016922 (-)
NOD/ShiLtJ	ENSMUSG00190034440	unclassified gene	Chr13:55683615-55686471 (-)
NZO/HlLtJ	ENSMUSG00225034751	unclassified gene	Chr13:59726767-59729623 (-)
PWK/PhJ	ENSLUMG00010025358	unclassified gene	Chr13:54964130-54966986 (-)
SPRET/EiJ	ENSMSPG00010041107	unclassified gene	Chr13:55328750-55331577 (-)
WSB/EiJ	ENSIUOG00005027185	unclassified gene	Chr13:55145016-55147871 (-)

Homology

• Gene Tree
  Gm34245
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34245
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114896 (Evidence)
• NCBI Gene
  118097969

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114896	Ensembl Gene Model | MGI Sequence Detail	2857	C57BL/6J
transcript	NR_169307	RefSeq | MGI Sequence Detail	3160	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69