Gm34189 Gene Detail

Summary

• Symbol
  Gm34189
• Name
  predicted gene, 34189

• Feature Type
  lncRNA gene
• IDs
  MGI:5593348
  NCBI Gene: 102637355
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:73820034-73828940 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593348	lncRNA gene	Chr12:73820034-73837784 (-)
129S1/SvImJ	ENSMUSG00200033078	lncRNA gene	Chr12:65745331-65753233 (-)
A/J	ENSMUSG00195014814	lncRNA gene	Chr12:68438752-68446655 (-)
AKR/J	ENSMUSG00220015614	lncRNA gene	Chr12:66242205-66250116 (-)
BALB/cJ	ENSMUSG00180036375	lncRNA gene	Chr12:67437469-67445376 (-)
C3H/HeJ	ENSMUSG00175029803	lncRNA gene	Chr12:70564505-70572407 (-)
C57BL/6NJ	ENSMUSG00215031614	lncRNA gene	Chr12:66813270-66821181 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037052	lncRNA gene	Chr12:66757835-66765737 (-)
CBA/J	ENSMUSG00210030905	lncRNA gene	Chr12:67001534-67009436 (-)
DBA/2J	ENSMUSG00185004987	lncRNA gene	Chr12:68902674-68910585 (-)
FVB/NJ	ENSMUSG00205035629	lncRNA gene	Chr12:66623609-66631522 (-)
JF1/MsJ	ENSUMUG00000024474	lncRNA gene	Chr12:72870001-72877901 (-)
LP/J	ENSMUSG00230022133	lncRNA gene	Chr12:75863255-75871157 (-)
NOD/ShiLtJ	ENSMUSG00190013138	lncRNA gene	Chr12:66053972-66061877 (-)
NZO/HlLtJ	ENSMUSG00225038851	lncRNA gene	Chr12:77917789-77925691 (-)
PWK/PhJ	ENSLUMG00010032013	lncRNA gene	Chr12:66927554-66935454 (-)
SPRET/EiJ	ENSMSPG00010029914	lncRNA gene	Chr12:68637085-68644646 (-)
WSB/EiJ	ENSIUOG00005012998	lncRNA gene	Chr12:66690133-66698041 (-)

Homology

• Gene Tree
  Gm34189
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34189
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  3

• Ensembl
  ENSMUSG00000120322 (Evidence)
• NCBI Gene
  102637355

Representative Sequences			Length	Strain/Species
genomic	102637355	NCBI Gene Model | MGI Sequence Detail	8907	C57BL/6J
transcript	XR_004937629	RefSeq | MGI Sequence Detail	2115	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm34189:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116667	Chr12:73828213-73828236 (-)	715 bp
Tssr116666	Chr12:73826493-73826500 (-)	2,443 bp