Gm34158 Gene Detail

Summary

• Symbol
  Gm34158
• Name
  predicted gene, 34158

• Feature Type
  lncRNA gene
• IDs
  MGI:5593317
  NCBI Gene: 102637314
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:76662044-76692136 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  802 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593317	lncRNA gene	Chr9:76662028-76693804 (+)
129S1/SvImJ	ENSMUSG00200019366	lncRNA gene	Chr9:73770816-73802777 (+)
A/J	ENSMUSG00195011262	lncRNA gene	Chr9:73556176-73587918 (+)
AKR/J	ENSMUSG00220015432	lncRNA gene	Chr9:73690848-73722598 (+)
BALB/cJ	ENSMUSG00180020970	lncRNA gene	Chr9:73669716-73701460 (+)
C3H/HeJ	ENSMUSG00175011735	lncRNA gene	Chr9:73702226-73733973 (+)
C57BL/6NJ	ENSMUSG00215018849	lncRNA gene	Chr9:73620781-73652529 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009701	lncRNA gene	Chr9:73359355-73389277 (+)
CBA/J	ENSMUSG00210013388	lncRNA gene	Chr9:73755181-73786933 (+)
DBA/2J	ENSMUSG00185007613	lncRNA gene	Chr9:73790456-73822210 (+)
FVB/NJ	ENSMUSG00205031451	lncRNA gene	Chr9:74062615-74094362 (+)
JF1/MsJ	ENSUMUG00000039533	lncRNA gene	Chr9:73759450-73791150 (+)
LP/J	ENSMUSG00230025509	lncRNA gene	Chr9:73945444-73977404 (+)
NOD/ShiLtJ	ENSMUSG00190037659	lncRNA gene	Chr9:73886160-73917908 (+)
NZO/HlLtJ	ENSMUSG00225026189	lncRNA gene	Chr9:74087895-74119647 (+)
PWK/PhJ	ENSLUMG00010016111	lncRNA gene	Chr9:73680262-73711963 (+)
SPRET/EiJ	ENSMSPG00010004220	lncRNA gene	Chr9:74876656-74908596 (+)
WSB/EiJ	ENSIUOG00005027495	lncRNA gene	Chr9:73228711-73260452 (+)

Homology

• Gene Tree
  Gm34158
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34158
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000111222 (Evidence)
• NCBI Gene
  102637314

Representative Sequences			Length	Strain/Species
genomic	102637314	NCBI Gene Model | MGI Sequence Detail	30093	C57BL/6J
transcript	XR_870928	RefSeq | MGI Sequence Detail	245	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;