Gm34102 Gene Detail

Summary

• Symbol
  Gm34102
• Name
  predicted gene, 34102

• Feature Type
  lncRNA gene
• IDs
  MGI:5593261
  NCBI Gene: 102637233
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:183126985-183131017 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593261	lncRNA gene	Chr1:183126931-183144106 (+)
129S1/SvImJ	ENSMUSG00200023073	lncRNA gene	Chr1:180894944-180912098 (+)
A/J	ENSMUSG00195044573	lncRNA gene	Chr1:180480185-180497339 (+)
AKR/J	ENSMUSG00220020779	lncRNA gene	Chr1:179725597-179742795 (+)
BALB/cJ	ENSMUSG00180039873	lncRNA gene	Chr1:180546372-180563528 (+)
C3H/HeJ	ENSMUSG00175042485	lncRNA gene	Chr1:180721983-180739137 (+)
C57BL/6NJ	ENSMUSG00215029327	lncRNA gene	Chr1:179941583-179958669 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044174	lncRNA gene	Chr1:178466970-178484137 (+)
CBA/J	ENSMUSG00210019258	lncRNA gene	Chr1:180372571-180389721 (+)
DBA/2J	ENSMUSG00185036160	lncRNA gene	Chr1:184991998-185009148 (+)
FVB/NJ	ENSMUSG00205034365	lncRNA gene	Chr1:179416518-179433716 (+)
JF1/MsJ	ENSUMUG00000006062	lncRNA gene	Chr1:184001127-184018229 (+)
LP/J	ENSMUSG00230024824	lncRNA gene	Chr1:184554111-184571265 (+)
NOD/ShiLtJ	ENSMUSG00190037899	lncRNA gene	Chr1:180396500-180413654 (+)
NZO/HlLtJ	ENSMUSG00225011999	lncRNA gene	Chr1:188300635-188317837 (+)
PWK/PhJ	ENSLUMG00010017142	lncRNA gene	Chr1:179247526-179264676 (+)
SPRET/EiJ	ENSMSPG00010035132	lncRNA gene	Chr1:182739833-182756953 (+)
WSB/EiJ	ENSIUOG00005011621	lncRNA gene	Chr1:179587183-179604337 (+)

Homology

• Gene Tree
  Gm34102
  

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000121189 (Evidence)
• NCBI Gene
  102637233

Representative Sequences			Length	Strain/Species
genomic	102637233	NCBI Gene Model | MGI Sequence Detail	4033	C57BL/6J
transcript	XR_389735	RefSeq | MGI Sequence Detail	902	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm34102:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr352	Chr1:183126984-183126997 (+)	6 bp