Gm34093 Gene Detail

Summary

• Symbol
  Gm34093
• Name
  predicted gene, 34093

• Feature Type
  lncRNA gene
• IDs
  MGI:5593252
  NCBI Gene: 102637224
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:36370356-36390441 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  757 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593252	lncRNA gene	Chr15:36370356-36390441 (-)
129S1/SvImJ	ENSMUSG00200027326	lncRNA gene	Chr15:33395513-33410295 (-)
A/J	ENSMUSG00195035787	lncRNA gene	Chr15:33314055-33328829 (-)
AKR/J	ENSMUSG00220032297	lncRNA gene	Chr15:33228006-33242783 (-)
BALB/cJ	ENSMUSG00180032081	lncRNA gene	Chr15:33276255-33291094 (-)
C3H/HeJ	ENSMUSG00175027049	lncRNA gene	Chr15:33480478-33495307 (-)
C57BL/6NJ	ENSMUSG00215024909	lncRNA gene	Chr15:33288335-33303170 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010790	lncRNA gene	Chr15:33322660-33337514 (-)
CBA/J	ENSMUSG00210018193	lncRNA gene	Chr15:33390946-33405777 (-)
DBA/2J	ENSMUSG00185034462	lncRNA gene	Chr15:33375750-33390579 (-)
FVB/NJ	ENSMUSG00205035697	lncRNA gene	Chr15:33285501-33300333 (-)
JF1/MsJ	ENSUMUG00000034683	lncRNA gene	Chr15:33271307-33286083 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190030784	lncRNA gene	Chr15:33357306-33372088 (-)
NZO/HlLtJ	ENSMUSG00225031925	lncRNA gene	Chr15:37067367-37082208 (-)
PWK/PhJ	ENSLUMG00010032197	lncRNA gene	Chr15:33448197-33463044 (-)
SPRET/EiJ	ENSMSPG00010012876	lncRNA gene	Chr15:34077255-34091578 (-)
WSB/EiJ	ENSIUOG00005032904	lncRNA gene	Chr15:33400449-33415326 (-)

Homology

• Gene Tree
  Gm34093
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000114981 (Evidence)
• NCBI Gene
  102637224

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114981	Ensembl Gene Model | MGI Sequence Detail	20086	C57BL/6J
transcript	ENSMUST00000282539	Ensembl | MGI Sequence Detail	1475	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm34093:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134016	Chr15:36374487-36374500 (-)	15,947 bp