Gm33799 Gene Detail

Summary

• Symbol
  Gm33799
• Name
  predicted gene, 33799

• Feature Type
  lncRNA gene
• IDs
  MGI:5592958
  NCBI Gene: 102636840
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:8475869-8491368 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  514 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592958	lncRNA gene	Chr17:8474829-8491375 (-)
129S1/SvImJ	ENSMUSG00200034909	lncRNA gene	Chr17:4716587-4733150 (-)
A/J	ENSMUSG00195024130	lncRNA gene	Chr17:4924899-4941433 (-)
AKR/J	ENSMUSG00220030680	lncRNA gene	Chr17:4983441-4999975 (-)
BALB/cJ	ENSMUSG00180026628	lncRNA gene	Chr17:4571131-4587662 (-)
C3H/HeJ	ENSMUSG00175036266	lncRNA gene	Chr17:4715433-4731965 (-)
C57BL/6NJ	ENSMUSG00215028773	lncRNA gene	Chr17:4717104-4733640 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022725	lncRNA gene	Chr17:4958565-4975182 (-)
CBA/J	ENSMUSG00210041297	lncRNA gene	Chr17:4382248-4398778 (-)
DBA/2J	ENSMUSG00185024541	lncRNA gene	Chr17:5474889-5491419 (-)
FVB/NJ	ENSMUSG00205009857	lncRNA gene	Chr17:4788032-4804569 (-)
JF1/MsJ	ENSUMUG00000038077	lncRNA gene	Chr17:5074723-5091338 (-)
LP/J	ENSMUSG00230034765	lncRNA gene	Chr17:6903780-6920308 (-)
NOD/ShiLtJ	ENSMUSG00190041114	lncRNA gene	Chr17:4920642-4937173 (-)
NZO/HlLtJ	ENSMUSG00225029077	lncRNA gene	Chr17:8824082-8840603 (-)
PWK/PhJ	ENSLUMG00010019743	lncRNA gene	Chr17:4889512-4906087 (-)
SPRET/EiJ	ENSMSPG00010039369	lncRNA gene	Chr17:9380533-9397467 (+)
WSB/EiJ	ENSIUOG00005014525	lncRNA gene	Chr17:4773688-4790238 (-)

Homology

• Gene Tree
  Gm33799
  

Human Diseases

• References
  6 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  374 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm33799
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  3

• Ensembl
  ENSMUSG00000120679 (Evidence)
• NCBI Gene
  102636840

Representative Sequences			Length	Strain/Species
genomic	102636840	NCBI Gene Model | MGI Sequence Detail	15500	C57BL/6J
transcript	XR_385198	RefSeq | MGI Sequence Detail	1554	C57BL/6J

References

• Summaries
  All 377

  Diseases 6

  Phenotypes 374
• Earliest
  J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
• Latest
  J:391449 Thibodeau J, et al., Loss of cystathionine-beta-synthase contributes to elevated OXPHOS, a vulnerability in Ara-C-resistant Myeloid Leukemia in Down syndrome. Biochem Pharmacol. 2026 Feb 13;247:117815

TSS for Gm33799:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr146356	Chr17:8491358-8491361 (-)	8 bp