Gm33728 Gene Detail

Summary

• Symbol
  Gm33728
• Name
  predicted gene, 33728

• Feature Type
  lncRNA gene
• IDs
  MGI:5592887
  NCBI Gene: 102636738
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:21104349-21128141 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  813 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592887	lncRNA gene	Chr10:21073205-21128144 (-)
129S1/SvImJ	ENSMUSG00200011303	lncRNA gene	Chr10:18068762-18117331 (-)
A/J	ENSMUSG00195006797	lncRNA gene	Chr10:18080863-18129446 (-)
AKR/J	ENSMUSG00220010322	lncRNA gene	Chr10:17986578-18040532 (-)
BALB/cJ	ENSMUSG00180015162	lncRNA gene	Chr10:18205114-18253689 (-)
C3H/HeJ	ENSMUSG00175021055	lncRNA gene	Chr10:18221794-18275811 (-)
C57BL/6NJ	ENSMUSG00215003823	lncRNA gene	Chr10:18028892-18082924 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030894	lncRNA gene	Chr10:17994588-18041695 (-)
CBA/J	ENSMUSG00210015701	lncRNA gene	Chr10:18158899-18212911 (-)
DBA/2J	ENSMUSG00185007488	lncRNA gene	Chr10:18143895-18197903 (-)
FVB/NJ	ENSMUSG00205018011	lncRNA gene	Chr10:18062024-18110611 (-)
JF1/MsJ	ENSUMUG00000013369	lncRNA gene	Chr10:18200673-18248651 (-)
LP/J	ENSMUSG00230018556	lncRNA gene	Chr10:19802800-19851365 (-)
NOD/ShiLtJ	ENSMUSG00190010983	lncRNA gene	Chr10:18139993-18188571 (-)
NZO/HlLtJ	ENSMUSG00225030386	lncRNA gene	Chr10:24284678-24338602 (-)
PWK/PhJ	ENSLUMG00010015348	lncRNA gene	Chr10:17975722-18024410 (-)
SPRET/EiJ	ENSMSPG00010011650	lncRNA gene	Chr10:18614104-18660489 (-)
WSB/EiJ	ENSIUOG00005024107	lncRNA gene	Chr10:17770679-17819284 (-)

Homology

• Gene Tree
  Gm33728
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33728
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  2

• Ensembl
  ENSMUSG00000111200 (Evidence)
• NCBI Gene
  102636738

Representative Sequences			Length	Strain/Species
genomic	102636738	NCBI Gene Model | MGI Sequence Detail	23793	C57BL/6J
transcript	XR_380155	RefSeq | MGI Sequence Detail	1238	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87