Gm33694 Gene Detail

Summary

• Symbol
  Gm33694
• Name
  predicted gene, 33694

• Feature Type
  lncRNA gene
• IDs
  MGI:5592853
  NCBI Gene: 102636694
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:31116408-31134091 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  583 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592853	lncRNA gene	Chr3:31114947-31134091 (-)
129S1/SvImJ	ENSMUSG00200024573	lncRNA gene	Chr3:27819594-27841032 (-)
A/J	ENSMUSG00195021526	lncRNA gene	Chr3:27829162-27850986 (-)
AKR/J	ENSMUSG00220008624	lncRNA gene	Chr3:27867556-27888675 (-)
BALB/cJ	ENSMUSG00180034752	lncRNA gene	Chr3:27960583-27982666 (-)
C3H/HeJ	ENSMUSG00175028143	lncRNA gene	Chr3:27822283-27843997 (-)
C57BL/6NJ	ENSMUSG00215018224	lncRNA gene	Chr3:28213774-28236875 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026008	lncRNA gene	Chr3:27785930-27804674 (-)
CBA/J	ENSMUSG00210036625	lncRNA gene	Chr3:27908973-27930147 (-)
DBA/2J	ENSMUSG00185009806	lncRNA gene	Chr3:26609353-26631094 (+)
FVB/NJ	ENSMUSG00205008867	lncRNA gene	Chr3:27358038-27379858 (-)
JF1/MsJ	ENSUMUG00000005462	lncRNA gene	Chr3:27641574-27659743 (-)
LP/J	ENSMUSG00230002134	lncRNA gene	Chr3:30064749-30086528 (-)
NOD/ShiLtJ	ENSMUSG00190038871	lncRNA gene	Chr3:28129292-28152029 (-)
NZO/HlLtJ	ENSMUSG00225007456	lncRNA gene	Chr3:32682687-32704356 (-)
PWK/PhJ	ENSLUMG00010036162	lncRNA gene	Chr3:27644448-27662700 (-)
SPRET/EiJ	ENSMSPG00010025278	lncRNA gene	Chr3:27995563-28013476 (-)
WSB/EiJ	ENSIUOG00005035970	lncRNA gene	Chr3:28154378-28175419 (-)

Homology

• Gene Tree
  Gm33694
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  25
• Gene trapped
  25
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3

• Ensembl
  ENSMUSG00000120476 (Evidence)
• NCBI Gene
  102636694

Representative Sequences			Length	Strain/Species
genomic	102636694	NCBI Gene Model | MGI Sequence Detail	17684	C57BL/6J
transcript	KY467936	GenBank | ENA | DDBJ | MGI Sequence Detail	352	ZRU/MplStud

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm33694:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32910	Chr3:31133776-31133810 (-)	298 bp