Gm33682 Gene Detail

Summary

• Symbol
  Gm33682
• Name
  predicted gene, 33682

• Feature Type
  lncRNA gene
• IDs
  MGI:5592841
  NCBI Gene: 102636679
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:108727985-108729882 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592841	lncRNA gene	Chr12:108727985-108733550 (-)
129S1/SvImJ	ENSMUSG00200029782	lncRNA gene	Chr12:100501241-100502179 (-)
A/J	ENSMUSG00195049869	lncRNA gene	Chr12:103062219-103063347 (-)
AKR/J	ENSMUSG00220044290	lncRNA gene	Chr12:100933144-100934020 (-)
BALB/cJ	ENSMUSG00180049130	lncRNA gene	Chr12:102264369-102265313 (-)
C3H/HeJ	ENSMUSG00175045821	lncRNA gene	Chr12:104872679-104873549 (-)
C57BL/6NJ	ENSMUSG00215047285	lncRNA gene	Chr12:101537281-101538219 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021840	lncRNA gene	Chr12:101014986-101015979 (-)
CBA/J	ENSMUSG00210031923	lncRNA gene	Chr12:101934279-101935149 (-)
DBA/2J	ENSMUSG00185030986	lncRNA gene	Chr12:103721645-103722677 (-)
FVB/NJ	ENSMUSG00205020280	lncRNA gene	Chr12:100951999-100953028 (-)
JF1/MsJ	ENSUMUG00000024339	lncRNA gene	Chr12:108477161-108478049 (-)
LP/J	ENSMUSG00230032322	lncRNA gene	Chr12:110766191-110767123 (-)
NOD/ShiLtJ	ENSMUSG00190033628	lncRNA gene	Chr12:84280027-84280897 (+)
NZO/HlLtJ	ENSMUSG00225039846	lncRNA gene	Chr12:112525059-112526091 (-)
PWK/PhJ	ENSLUMG00010051417	lncRNA gene	Chr12:101955237-101956212 (-)
SPRET/EiJ	ENSMSPG00010023358	lncRNA gene	Chr12:104256597-104257541 (-)
WSB/EiJ	ENSIUOG00005010145	lncRNA gene	Chr12:100952399-100953440 (-)

Homology

• Gene Tree
  Gm33682
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000112971 (Evidence)
• NCBI Gene
  102636679

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112971	Ensembl Gene Model | MGI Sequence Detail	1898	C57BL/6J
transcript	ENSMUST00000222233	Ensembl | MGI Sequence Detail	1269	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;