Gm33667 Gene Detail

Summary

• Symbol
  Gm33667
• Name
  predicted gene, 33667

• Feature Type
  lncRNA gene
• IDs
  MGI:5592826
  NCBI Gene: 102636662
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:59276514-59278181 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592826	lncRNA gene	Chr1:59276151-59278202 (+)
129S1/SvImJ	ENSMUSG00200019101	lncRNA gene	Chr1:56776190-56777767 (+)
A/J	ENSMUSG00195031014	lncRNA gene	Chr1:56314717-56316288 (+)
AKR/J	ENSMUSG00220040452	lncRNA gene	Chr1:56404903-56406474 (+)
BALB/cJ	ENSMUSG00180014277	lncRNA gene	Chr1:56555554-56557131 (+)
C3H/HeJ	ENSMUSG00175001288	lncRNA gene	Chr1:56692161-56693732 (+)
C57BL/6NJ	ENSMUSG00215036890	lncRNA gene	Chr1:56624045-56625616 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014004	lncRNA gene	Chr1:56466194-56467765 (+)
CBA/J	ENSMUSG00210054200	lncRNA gene	Chr1:56377183-56378754 (+)
DBA/2J	ENSMUSG00185055839	lncRNA gene	Chr1:57496895-57498466 (+)
FVB/NJ	ENSMUSG00205025911	lncRNA gene	Chr1:56338002-56339573 (+)
JF1/MsJ	ENSUMUG00000049075	lncRNA gene	Chr1:56465328-56466899 (+)
LP/J	ENSMUSG00230030668	lncRNA gene	Chr1:57497501-57499072 (+)
NOD/ShiLtJ	ENSMUSG00190043281	lncRNA gene	Chr1:56536638-56538215 (+)
NZO/HlLtJ	ENSMUSG00225009326	lncRNA gene	Chr1:60703831-60705402 (+)
PWK/PhJ	ENSLUMG00010026135	lncRNA gene	Chr1:55976989-55978560 (+)
SPRET/EiJ	ENSMSPG00010026239	lncRNA gene	Chr1:57920008-57921583 (+)
WSB/EiJ	ENSIUOG00005020979	lncRNA gene	Chr1:56161302-56162879 (+)

Homology

• Gene Tree
  Gm33667
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Gene trapped
  2
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm33667
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000120458 (Evidence)
• NCBI Gene
  102636662

Representative Sequences			Length	Strain/Species
genomic	102636662	NCBI Gene Model | MGI Sequence Detail	1668	C57BL/6J
transcript	NR_168353	RefSeq | MGI Sequence Detail	737	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm33667:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6863	Chr1:59276627-59276652 (+)	126 bp