Gm33619 Gene Detail

Summary

• Symbol
  Gm33619
• Name
  predicted gene, 33619

• Feature Type
  lncRNA gene
• IDs
  MGI:5592778
  NCBI Gene: 102636600
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:21062843-21064517 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592778	lncRNA gene	Chr10:21058551-21066040 (+)
129S1/SvImJ	ENSMUSG00200011312	lncRNA gene	Chr10:18053335-18059260 (+)
A/J	ENSMUSG00195006798	lncRNA gene	Chr10:18065438-18071361 (+)
AKR/J	ENSMUSG00220010328	lncRNA gene	Chr10:17971176-17977097 (+)
BALB/cJ	ENSMUSG00180015167	lncRNA gene	Chr10:18189683-18195612 (+)
C3H/HeJ	ENSMUSG00175021061	lncRNA gene	Chr10:18206388-18212313 (+)
C57BL/6NJ	ENSMUSG00215003825	lncRNA gene	Chr10:18013482-18019411 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030864	lncRNA gene	Chr10:17979212-17985040 (+)
CBA/J	ENSMUSG00210015704	lncRNA gene	Chr10:18143495-18149418 (+)
DBA/2J	ENSMUSG00185007492	lncRNA gene	Chr10:18128488-18134414 (+)
FVB/NJ	ENSMUSG00205018035	lncRNA gene	Chr10:18046595-18052522 (+)
JF1/MsJ	ENSUMUG00000013323	lncRNA gene	Chr10:18185195-18191177 (+)
LP/J	ENSMUSG00230018439	lncRNA gene	Chr10:19787373-19793298 (+)
NOD/ShiLtJ	ENSMUSG00190010989	lncRNA gene	Chr10:18124566-18130491 (+)
NZO/HlLtJ	ENSMUSG00225030202	lncRNA gene	Chr10:24269276-24275197 (+)
PWK/PhJ	ENSLUMG00010015340	lncRNA gene	Chr10:17960264-17966236 (+)
SPRET/EiJ	ENSMSPG00010011655	lncRNA gene	Chr10:18598641-18604564 (+)
WSB/EiJ	ENSIUOG00005024121	lncRNA gene	Chr10:17755274-17761183 (+)

Homology

• Gene Tree
  Gm33619
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33619
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000111005 (Evidence)
• NCBI Gene
  102636600

Representative Sequences			Length	Strain/Species
genomic	102636600	NCBI Gene Model | MGI Sequence Detail	1675	C57BL/6J
transcript	NR_152786	RefSeq | MGI Sequence Detail	598	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm33619:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92623	Chr10:21062833-21062865 (+)	6 bp