Gm33594 Gene Detail

Summary

• Symbol
  Gm33594
• Name
  predicted gene, 33594
• Synonyms
  Gm45624

• Feature Type
  lncRNA gene
• IDs
  MGI:5592753
  NCBI Gene: 102636562
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:57872204-57876029 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  270 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592753	lncRNA gene	Chr2:57872204-57876029 (-)
129S1/SvImJ	ENSMUSG00200002992	lncRNA gene	Chr2:54946838-54950657 (-)
A/J	ENSMUSG00195005282	lncRNA gene	Chr2:55067227-55071052 (-)
AKR/J	ENSMUSG00220007454	lncRNA gene	Chr2:55169264-55173080 (-)
BALB/cJ	ENSMUSG00180020308	lncRNA gene	Chr2:55012297-55016122 (-)
C3H/HeJ	ENSMUSG00175013705	lncRNA gene	Chr2:55092255-55096086 (-)
C57BL/6NJ	ENSMUSG00215009284	lncRNA gene	Chr2:55060922-55064747 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023094	lncRNA gene	Chr2:54427613-54431475 (-)
CBA/J	ENSMUSG00210034431	lncRNA gene	Chr2:55111752-55115580 (-)
DBA/2J	ENSMUSG00185008629	lncRNA gene	Chr2:54967698-54971523 (-)
FVB/NJ	ENSMUSG00205020662	lncRNA gene	Chr2:54608337-54612163 (-)
JF1/MsJ	ENSUMUG00000022682	lncRNA gene	Chr2:54671384-54675221 (-)
LP/J	ENSMUSG00230001719	lncRNA gene	Chr2:56819188-56823010 (-)
NOD/ShiLtJ	ENSMUSG00190044663	lncRNA gene	Chr2:55049079-55052904 (-)
NZO/HlLtJ	ENSMUSG00225001065	lncRNA gene	Chr2:64540844-64544659 (-)
PWK/PhJ	ENSLUMG00010005449	lncRNA gene	Chr2:54830709-54834531 (-)
SPRET/EiJ	ENSMSPG00010012100	lncRNA gene	Chr2:55935029-55939051 (-)
WSB/EiJ	ENSIUOG00005028797	lncRNA gene	Chr2:55043140-55046963 (-)

Homology

• Gene Tree
  Gm33594
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33594
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000110205 (Evidence)
• NCBI Gene
  102636562

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110205	Ensembl Gene Model | MGI Sequence Detail	3826	C57BL/6J
transcript	ENSMUST00000209502	Ensembl | MGI Sequence Detail	1333	Not Applicable

Other
Accession IDs

MGI:5791460

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;