Gm33525 Gene Detail

Summary

• Symbol
  Gm33525
• Name
  predicted gene, 33525

• Feature Type
  lncRNA gene
• IDs
  MGI:5592684
  NCBI Gene: 102636468
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:97280423-97290391 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  384 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592684	lncRNA gene	Chr14:97162069-97290442 (-)
129S1/SvImJ	ENSMUSG00200019683	lncRNA gene	Chr14:85807850-85818224 (-)
A/J	ENSMUSG00195019712	lncRNA gene	Chr14:86000102-86010040 (-)
AKR/J	ENSMUSG00220002383	lncRNA gene	Chr14:85398145-85408084 (-)
BALB/cJ	ENSMUSG00180004637	lncRNA gene	Chr14:85483274-85493210 (-)
C3H/HeJ	ENSMUSG00175002652	lncRNA gene	Chr14:87349412-87359348 (-)
C57BL/6NJ	ENSMUSG00215021468	lncRNA gene	Chr14:85512778-85523138 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016538	lncRNA gene	Chr14:86985876-86995799 (-)
CBA/J	ENSMUSG00210007847	lncRNA gene	Chr14:86038945-86048879 (-)
DBA/2J	ENSMUSG00185015417	lncRNA gene	Chr14:91212909-91222845 (-)
FVB/NJ	ENSMUSG00205014294	lncRNA gene	Chr14:85119107-85129045 (-)
JF1/MsJ	ENSUMUG00000013223	lncRNA gene	Chr14:102173542-102183920 (-)
LP/J	ENSMUSG00230005239	lncRNA gene	Chr14:103047424-103057786 (-)
NOD/ShiLtJ	ENSMUSG00190009624	lncRNA gene	Chr14:85801814-85812176 (-)
NZO/HlLtJ	ENSMUSG00225025201	lncRNA gene	Chr14:93455726-93466090 (-)
PWK/PhJ	ENSLUMG00010004766	lncRNA gene	Chr14:85068998-85078934 (-)
SPRET/EiJ	ENSMSPG00010009421	lncRNA gene	Chr14:88832150-88848223 (-)
WSB/EiJ	ENSIUOG00005018544	lncRNA gene	Chr14:85002418-85012369 (-)

Homology

• Gene Tree
  Gm33525
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33525
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000115229 (Evidence)
• NCBI Gene
  102636468

Representative Sequences			Length	Strain/Species
genomic	102636468	NCBI Gene Model | MGI Sequence Detail	9969	C57BL/6J
transcript	XR_383685	RefSeq | MGI Sequence Detail	427	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm33525:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129982	Chr14:97290389-97290398 (-)	-3 bp