Gm33524 Gene Detail

Summary

• Symbol
  Gm33524
• Name
  predicted gene, 33524

• Feature Type
  lncRNA gene
• IDs
  MGI:5592683
  NCBI Gene: 102636467
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:70233491-70301064 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1420 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592683	lncRNA gene	Chr14:70233485-70303571 (-)
129S1/SvImJ	ENSMUSG00200031299	lncRNA gene	Chr14:58647469-58686881 (-)
A/J	ENSMUSG00195014817	lncRNA gene	Chr14:58828650-58867823 (-)
AKR/J	ENSMUSG00220034315	lncRNA gene	Chr14:58164400-58203565 (-)
BALB/cJ	ENSMUSG00180035826	lncRNA gene	Chr14:58437209-58476388 (-)
C3H/HeJ	ENSMUSG00175039593	lncRNA gene	Chr14:60197734-60236893 (-)
C57BL/6NJ	ENSMUSG00215029209	lncRNA gene	Chr14:58373908-58413055 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039519	lncRNA gene	Chr14:60076870-60116227 (-)
CBA/J	ENSMUSG00210040900	lncRNA gene	Chr14:58813588-58852744 (-)
DBA/2J	ENSMUSG00185023636	lncRNA gene	Chr14:63983173-64022305 (-)
FVB/NJ	ENSMUSG00205037556	lncRNA gene	Chr14:58323833-58362985 (-)
JF1/MsJ	ENSUMUG00000042298	lncRNA gene	Chr14:75158290-75197738 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190043178	lncRNA gene	Chr14:58608756-58647894 (-)
NZO/HlLtJ	ENSMUSG00225040467	lncRNA gene	Chr14:66335594-66374738 (-)
PWK/PhJ	ENSLUMG00010039018	lncRNA gene	Chr14:58007979-58047393 (-)
SPRET/EiJ	ENSMSPG00010028236	lncRNA gene	Chr14:61572077-61612080 (-)
WSB/EiJ	ENSIUOG00005042066	lncRNA gene	Chr14:58053948-58093113 (-)

Homology

• Gene Tree
  Gm33524
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33524
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  4

• Ensembl
  ENSMUSG00000114446 (Evidence)
• NCBI Gene
  102636467

Representative Sequences			Length	Strain/Species
genomic	102636467	NCBI Gene Model | MGI Sequence Detail	67574	C57BL/6J
transcript	XR_383556	RefSeq | MGI Sequence Detail	3931	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm33524:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129510	Chr14:70294419-70294464 (-)	6,622 bp