Gm33501 Gene Detail

Summary

• Symbol
  Gm33501
• Name
  predicted gene, 33501
• Synonyms
  Gm45586

• Feature Type
  lncRNA gene
• IDs
  MGI:5592660
  NCBI Gene: 102636438
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:57325149-57341838 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  497 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592660	lncRNA gene	Chr8:57285289-57341947 (-)
129S1/SvImJ	ENSMUSG00200007853	lncRNA gene	Chr8:52119650-52142638 (-)
A/J	ENSMUSG00195012688	lncRNA gene	Chr8:52521145-52544134 (-)
AKR/J	ENSMUSG00220005932	lncRNA gene	Chr8:52339233-52367553 (-)
BALB/cJ	ENSMUSG00180014242	lncRNA gene	Chr8:52167807-52196127 (-)
C3H/HeJ	ENSMUSG00175008257	lncRNA gene	Chr8:52343129-52371447 (-)
C57BL/6NJ	ENSMUSG00215008638	lncRNA gene	Chr8:52118785-52147112 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006678	lncRNA gene	Chr8:52115208-52137769 (-)
CBA/J	ENSMUSG00210009120	lncRNA gene	Chr8:52195364-52218349 (-)
DBA/2J	ENSMUSG00185008849	lncRNA gene	Chr8:58327342-58355659 (-)
FVB/NJ	ENSMUSG00205012867	lncRNA gene	Chr8:51581389-51609703 (-)
JF1/MsJ	ENSUMUG00000015277	lncRNA gene	Chr8:60671874-60694641 (-)
LP/J	ENSMUSG00230007014	lncRNA gene	Chr8:61985015-62013332 (-)
NOD/ShiLtJ	ENSMUSG00190009952	lncRNA gene	Chr8:52114053-52142368 (-)
NZO/HlLtJ	ENSMUSG00225031207	lncRNA gene	Chr8:65418648-65441641 (-)
PWK/PhJ	ENSLUMG00010013665	lncRNA gene	Chr8:52033533-52056257 (-)
SPRET/EiJ	ENSMSPG00010014787	lncRNA gene	Chr8:53116093-53144007 (-)
WSB/EiJ	ENSIUOG00005017604	lncRNA gene	Chr8:53022578-53045558 (-)

Homology

• Gene Tree
  Gm33501
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33501
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000110000 (Evidence)
• NCBI Gene
  102636438

Representative Sequences			Length	Strain/Species
genomic	102636438	NCBI Gene Model | MGI Sequence Detail	16690	C57BL/6J
transcript	XR_378983	RefSeq | MGI Sequence Detail	585	C57BL/6J

Other
Accession IDs

MGI:5791422

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;