Gm33373 Gene Detail

Summary

• Symbol
  Gm33373
• Name
  predicted gene, 33373

• Feature Type
  lncRNA gene
• IDs
  MGI:5592532
  NCBI Gene: 102636256
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:80860839-80871502 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  468 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592532	lncRNA gene	Chr17:80860839-80871502 (+)
129S1/SvImJ	ENSMUSG00200025165	lncRNA gene	Chr17:76228822-76239302 (+)
A/J	ENSMUSG00195028440	lncRNA gene	Chr17:77602342-77612862 (+)
AKR/J	ENSMUSG00220014027	lncRNA gene	Chr17:76519606-76530422 (+)
BALB/cJ	ENSMUSG00180005012	lncRNA gene	Chr17:77302154-77312632 (+)
C3H/HeJ	ENSMUSG00175016002	lncRNA gene	Chr17:76573169-76583647 (+)
C57BL/6NJ	ENSMUSG00215015908	lncRNA gene	Chr17:76288865-76299343 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015414	lncRNA gene	Chr17:77167180-77178306 (+)
CBA/J	ENSMUSG00210021108	lncRNA gene	Chr17:76434584-76445064 (+)
DBA/2J	ENSMUSG00185013033	lncRNA gene	Chr17:79268134-79278612 (+)
FVB/NJ	ENSMUSG00205030949	lncRNA gene	Chr17:77050275-77060753 (+)
JF1/MsJ	ENSUMUG00000025403	lncRNA gene	Chr17:78997243-79008027 (+)
LP/J	ENSMUSG00230021935	lncRNA gene	Chr17:80269584-80280062 (+)
NOD/ShiLtJ	ENSMUSG00190009851	lncRNA gene	Chr17:76334907-76345385 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010005670	lncRNA gene	Chr17:76219514-76230345 (+)
SPRET/EiJ	ENSMSPG00010009191	lncRNA gene	Chr17:76712393-76722780 (+)
WSB/EiJ	ENSIUOG00005010921	lncRNA gene	Chr17:77266575-77277054 (+)

Homology

• Gene Tree
  Gm33373
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000117375 (Evidence)
• NCBI Gene
  102636256

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117375	Ensembl Gene Model | MGI Sequence Detail	10664	C57BL/6J
transcript	ENSMUST00000340411	Ensembl | MGI Sequence Detail	1346	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14