Gm33321 Gene Detail

Summary

• Symbol
  Gm33321
• Name
  predicted gene, 33321

• Feature Type
  lncRNA gene
• IDs
  MGI:5592480
  NCBI Gene: 102636181
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:58538259-58540830 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592480	lncRNA gene	Chr14:58538192-58601273 (+)
129S1/SvImJ	ENSMUSG00200042914	lncRNA gene	Chr14:47123744-47186711 (+)
A/J	ENSMUSG00195037025	lncRNA gene	Chr14:47339018-47401986 (+)
AKR/J	ENSMUSG00220031083	lncRNA gene	Chr14:46665987-46733928 (+)
BALB/cJ	ENSMUSG00180052531	lncRNA gene	Chr14:46961036-47023997 (+)
C3H/HeJ	ENSMUSG00175051150	lncRNA gene	Chr14:48667316-48730278 (+)
C57BL/6NJ	ENSMUSG00215049886	lncRNA gene	Chr14:46861689-46924663 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050520	lncRNA gene	Chr14:48665294-48726302 (+)
CBA/J	ENSMUSG00210049067	lncRNA gene	Chr14:47329345-47392291 (+)
DBA/2J	ENSMUSG00185034399	lncRNA gene	Chr14:52465450-52528451 (+)
FVB/NJ	ENSMUSG00205042850	lncRNA gene	Chr14:46727551-46796469 (+)
JF1/MsJ	ENSUMUG00000046485	lncRNA gene	Chr14:63636090-63692622 (+)
LP/J	ENSMUSG00230036986	lncRNA gene	Chr14:64492723-64555699 (+)
NOD/ShiLtJ	ENSMUSG00190051488	lncRNA gene	Chr14:47095658-47158609 (+)
NZO/HlLtJ	ENSMUSG00225047211	lncRNA gene	Chr14:54786004-54848948 (+)
PWK/PhJ	ENSLUMG00010049411	lncRNA gene	Chr14:46554907-46617853 (+)
SPRET/EiJ	ENSMSPG00010047692	lncRNA gene	Chr14:50068907-50133203 (+)
WSB/EiJ	ENSIUOG00005046574	lncRNA gene	Chr14:46519458-46576062 (+)

Homology

• Gene Tree
  Gm33321
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33321
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2

• Ensembl
  ENSMUSG00000114690 (Evidence)
• NCBI Gene
  102636181

Representative Sequences			Length	Strain/Species
genomic	102636181	NCBI Gene Model | MGI Sequence Detail	2572	C57BL/6J
transcript	XR_383465	RefSeq | MGI Sequence Detail	647	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;