Gm33312 Pseudogene Detail

Summary

• Symbol
  Gm33312
• Name
  predicted gene, 33312

• Feature Type
  pseudogene
• IDs
  MGI:5592471
  NCBI Gene: 102636169
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:85709216-85709642 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592471	pseudogene	Chr12:85689548-85709668 (+)
129S1/SvImJ	ENSMUSG00200050323	pseudogene	Chr12:77724445-77724871 (+)
A/J	ENSMUSG00195035876	pseudogene	Chr12:80344079-80344506 (+)
AKR/J	ENSMUSG00220049272	pseudogene	Chr12:78140009-78140435 (+)
BALB/cJ	ENSMUSG00180025619	pseudogene	Chr12:79381802-79382228 (+)
C3H/HeJ	ENSMUSG00175040683	pseudogene	Chr12:82474876-82475302 (+)
C57BL/6NJ	ENSMUSG00215046448	pseudogene	Chr12:78688262-78688689 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032854	pseudogene	Chr12:78650049-78650470 (+)
CBA/J	ENSMUSG00210046566	pseudogene	Chr12:78888077-78888503 (+)
DBA/2J	ENSMUSG00185002613	pseudogene	Chr12:80745327-80745753 (+)
FVB/NJ	ENSMUSG00205040498	pseudogene	Chr12:78556862-78557288 (+)
JF1/MsJ	ENSUMUG00000048157	pseudogene	Chr12:84730961-84731383 (+)
LP/J	ENSMUSG00230045677	pseudogene	Chr12:87807516-87807942 (+)
NOD/ShiLtJ	ENSMUSG00190049615	pseudogene	Chr12:77945078-77945503 (+)
NZO/HlLtJ	ENSMUSG00225052559	pseudogene	Chr12:89844641-89845067 (+)
PWK/PhJ	ENSLUMG00010029269	pseudogene	Chr12:78750885-78751295 (+)
SPRET/EiJ	ENSMSPG00010020191	pseudogene	Chr12:80567745-80568077 (+)
WSB/EiJ	ENSIUOG00005046081	pseudogene	Chr12:78597853-78598279 (+)

Homology

• Gene Tree
  Gm33312
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm33312
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000113249 (Evidence)
• NCBI Gene
  102636169

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113249	Ensembl Gene Model | MGI Sequence Detail	427	C57BL/6J
transcript	ENSMUST00000222443	Ensembl | MGI Sequence Detail	332	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14