Gm33302 Gene Detail

Summary

• Symbol
  Gm33302
• Name
  predicted gene, 33302

• Feature Type
  lncRNA gene
• IDs
  MGI:5592461
  NCBI Gene: 102636155
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:97157792-97163946 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  317 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592461	lncRNA gene	Chr9:97157747-97176521 (+)
129S1/SvImJ	ENSMUSG00200017261	lncRNA gene	Chr9:94287320-94306098 (+)
A/J	ENSMUSG00195020010	lncRNA gene	Chr9:93538339-93557087 (+)
AKR/J	ENSMUSG00220041295	lncRNA gene	Chr9:93891052-93909820 (+)
BALB/cJ	ENSMUSG00180027643	lncRNA gene	Chr9:93858065-93876827 (+)
C3H/HeJ	ENSMUSG00175013369	lncRNA gene	Chr9:94197516-94216273 (+)
C57BL/6NJ	ENSMUSG00215031492	lncRNA gene	Chr9:94174244-94193010 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014327	lncRNA gene	Chr9:94027342-94046101 (+)
CBA/J	ENSMUSG00210015727	lncRNA gene	Chr9:94039289-94058041 (+)
DBA/2J	ENSMUSG00185012528	lncRNA gene	Chr9:94225550-94244303 (+)
FVB/NJ	ENSMUSG00205033795	lncRNA gene	Chr9:94230559-94249309 (+)
JF1/MsJ	ENSUMUG00000045127	lncRNA gene	Chr9:93988666-94018093 (+)
LP/J	ENSMUSG00230021589	lncRNA gene	Chr9:94393758-94412511 (+)
NOD/ShiLtJ	ENSMUSG00190041579	lncRNA gene	Chr9:93860850-93879609 (+)
NZO/HlLtJ	ENSMUSG00225021574	lncRNA gene	Chr9:94564144-94593571 (+)
PWK/PhJ	ENSLUMG00010028166	lncRNA gene	Chr9:93948736-93976293 (+)
SPRET/EiJ	ENSMSPG00010003971	lncRNA gene	Chr9:95745934-95761802 (+)
WSB/EiJ	ENSIUOG00005026155	lncRNA gene	Chr9:93300250-93319015 (+)

Homology

• Gene Tree
  Gm33302
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33302
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  2

• Ensembl
  ENSMUSG00000120741 (Evidence)
• NCBI Gene
  102636155

Representative Sequences			Length	Strain/Species
genomic	102636155	NCBI Gene Model | MGI Sequence Detail	6155	C57BL/6J
transcript	NR_168655	RefSeq | MGI Sequence Detail	840	ZRU/MplStud

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm33302:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86633	Chr9:97157780-97157807 (+)	2 bp