Gm33152 Gene Detail

Summary

• Symbol
  Gm33152
• Name
  predicted gene, 33152

• Feature Type
  lncRNA gene
• IDs
  MGI:5592311
  NCBI Gene: 102635943
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:78177859-78179688 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592311	lncRNA gene	Chr1:78177711-78179696 (+)
129S1/SvImJ	ENSMUSG00200035657	lncRNA gene	Chr1:75866420-75868237 (+)
A/J	ENSMUSG00195011186	lncRNA gene	Chr1:75275734-75277555 (+)
AKR/J	ENSMUSG00220010595	lncRNA gene	Chr1:75427553-75429369 (+)
BALB/cJ	ENSMUSG00180021007	lncRNA gene	Chr1:75538347-75540168 (+)
C3H/HeJ	ENSMUSG00175018167	lncRNA gene	Chr1:75680645-75682466 (+)
C57BL/6NJ	ENSMUSG00215030062	lncRNA gene	Chr1:75577963-75579826 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028588	lncRNA gene	Chr1:75285173-75287021 (+)
CBA/J	ENSMUSG00210042126	lncRNA gene	Chr1:75396931-75398746 (+)
DBA/2J	ENSMUSG00185032136	lncRNA gene	Chr1:76452622-76454489 (+)
FVB/NJ	ENSMUSG00205040123	lncRNA gene	Chr1:74997301-74999117 (+)
JF1/MsJ	ENSUMUG00000006369	lncRNA gene	Chr1:75334220-75336037 (+)
LP/J	ENSMUSG00230014805	lncRNA gene	Chr1:76442021-76443839 (+)
NOD/ShiLtJ	ENSMUSG00190038502	lncRNA gene	Chr1:75600366-75602233 (+)
NZO/HlLtJ	ENSMUSG00225040980	lncRNA gene	Chr1:79661143-79662965 (+)
PWK/PhJ	ENSLUMG00010014230	lncRNA gene	Chr1:74934259-74936084 (+)
SPRET/EiJ	ENSMSPG00010020249	lncRNA gene	Chr1:77071382-77073196 (+)
WSB/EiJ	ENSIUOG00005014019	lncRNA gene	Chr1:75198866-75200711 (+)

Homology

• Gene Tree
  Gm33152
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm33152
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000120041 (Evidence)
• NCBI Gene
  102635943

Representative Sequences			Length	Strain/Species
genomic	102635943	NCBI Gene Model | MGI Sequence Detail	1830	C57BL/6J
transcript	NR_168357	RefSeq | MGI Sequence Detail	1083	ZRU/MplStud

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm33152:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7566	Chr1:78177849-78177883 (+)	7 bp