Gm33151 Gene Detail

Summary

• Symbol
  Gm33151
• Name
  predicted gene, 33151

• Feature Type
  lncRNA gene
• IDs
  MGI:5592310
  NCBI Gene: 102635942
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:106606551-106607549 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592310	lncRNA gene	Chr5:106606441-106614812 (+)
129S1/SvImJ	ENSMUSG00200006221	lncRNA gene	Chr5:100340372-100341418 (+)
A/J	ENSMUSG00195035356	lncRNA gene	Chr5:99802609-99803655 (+)
AKR/J	ENSMUSG00220041687	lncRNA gene	Chr5:99358970-99360016 (+)
BALB/cJ	ENSMUSG00180035787	lncRNA gene	Chr5:99954726-99955772 (+)
C3H/HeJ	ENSMUSG00175048109	lncRNA gene	Chr5:101993315-101994361 (+)
C57BL/6NJ	ENSMUSG00215025871	lncRNA gene	Chr5:100008434-100009480 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024986	lncRNA gene	Chr5:99226215-99227262 (+)
CBA/J	ENSMUSG00210035292	lncRNA gene	Chr5:100750911-100751957 (+)
DBA/2J	ENSMUSG00185049991	lncRNA gene	Chr5:103664466-103665512 (+)
FVB/NJ	ENSMUSG00205044363	lncRNA gene	Chr5:99679637-99680683 (+)
JF1/MsJ	ENSUMUG00000020420	lncRNA gene	Chr5:106704037-106705084 (+)
LP/J	ENSMUSG00230031539	lncRNA gene	Chr5:107881640-107882686 (+)
NOD/ShiLtJ	ENSMUSG00190028155	lncRNA gene	Chr5:99669583-99670629 (+)
NZO/HlLtJ	ENSMUSG00225026179	lncRNA gene	Chr5:115503372-115504418 (+)
PWK/PhJ	ENSLUMG00010015574	lncRNA gene	Chr5:98709508-98710555 (+)
SPRET/EiJ	ENSMSPG00010045855	lncRNA gene	Chr5:101801660-101802708 (+)
WSB/EiJ	ENSIUOG00005032057	lncRNA gene	Chr5:102390720-102391766 (+)

Homology

• Gene Tree
  Gm33151
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm33151
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1

• Ensembl
  ENSMUSG00000120527 (Evidence)
• NCBI Gene
  102635942

Representative Sequences			Length	Strain/Species
genomic	102635942	NCBI Gene Model | MGI Sequence Detail	999	C57BL/6J
transcript	NR_176034	RefSeq | MGI Sequence Detail	445	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm33151:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr47756	Chr5:106606545-106606567 (+)	5 bp