Gm33115 Gene Detail

Summary

• Symbol
  Gm33115
• Name
  predicted gene, 33115

• Feature Type
  lncRNA gene
• IDs
  MGI:5592274
  NCBI Gene: 102635895
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:43995929-43999627 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592274	lncRNA gene	Chr13:43995906-43999691 (+)
129S1/SvImJ	ENSMUSG00200036302	lncRNA gene	Chr13:41261228-41264927 (+)
A/J	ENSMUSG00195035558	lncRNA gene	Chr13:40321186-40324883 (+)
AKR/J	ENSMUSG00220032136	lncRNA gene	Chr13:40110802-40114521 (+)
BALB/cJ	ENSMUSG00180009392	lncRNA gene	Chr13:40627834-40631531 (+)
C3H/HeJ	ENSMUSG00175029475	lncRNA gene	Chr13:40592248-40595945 (+)
C57BL/6NJ	ENSMUSG00215007696	lncRNA gene	Chr13:40738703-40742426 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033272	lncRNA gene	Chr13:40649547-40653254 (+)
CBA/J	ENSMUSG00210028042	lncRNA gene	Chr13:40597836-40601533 (+)
DBA/2J	ENSMUSG00185032084	lncRNA gene	Chr13:41393949-41397668 (+)
FVB/NJ	ENSMUSG00205013043	lncRNA gene	Chr13:40349700-40353397 (+)
JF1/MsJ	ENSUMUG00000016305	lncRNA gene	Chr13:40941091-40944799 (+)
LP/J	ENSMUSG00230030292	lncRNA gene	Chr13:50730186-50733883 (+)
NOD/ShiLtJ	ENSMUSG00190013000	lncRNA gene	Chr13:40792854-40796573 (+)
NZO/HlLtJ	ENSMUSG00225036226	lncRNA gene	Chr13:44499107-44502826 (+)
PWK/PhJ	ENSLUMG00010032568	lncRNA gene	Chr13:39785428-39789125 (+)
SPRET/EiJ	ENSMSPG00010010950	lncRNA gene	Chr13:39849683-39853466 (+)
WSB/EiJ	ENSIUOG00005030164	lncRNA gene	Chr13:39933742-39937491 (+)

Homology

• Gene Tree
  Gm33115
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm33115
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2

• Ensembl
  ENSMUSG00000114192 (Evidence)
• NCBI Gene
  102635895

Representative Sequences			Length	Strain/Species
genomic	102635895	NCBI Gene Model | MGI Sequence Detail	3699	C57BL/6J
transcript	BC049687	GenBank | ENA | DDBJ | MGI Sequence Detail	910	Not Specified

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69