Gm33103 Gene Detail

Summary

• Symbol
  Gm33103
• Name
  predicted gene, 33103
• Synonyms
  Gm45729

• Feature Type
  lncRNA gene
• IDs
  MGI:5592262
  NCBI Gene: 102635877
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:69423101-69455135 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1012 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592262	lncRNA gene	Chr8:69409503-69480544 (-)
129S1/SvImJ	ENSMUSG00200033307	lncRNA gene	Chr8:64267966-64298238 (-)
A/J	ENSMUSG00195018378	lncRNA gene	Chr8:64678538-64708808 (-)
AKR/J	ENSMUSG00220025082	lncRNA gene	Chr8:64509271-64539545 (-)
BALB/cJ	ENSMUSG00180029308	lncRNA gene	Chr8:64242625-64272896 (-)
C3H/HeJ	ENSMUSG00175022046	lncRNA gene	Chr8:64505923-64536194 (-)
C57BL/6NJ	ENSMUSG00215036845	lncRNA gene	Chr8:64250685-64281223 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040347	lncRNA gene	Chr8:64014426-64044709 (-)
CBA/J	ENSMUSG00210035547	lncRNA gene	Chr8:64389712-64419983 (-)
DBA/2J	ENSMUSG00185022670	lncRNA gene	Chr8:70437984-70468256 (-)
FVB/NJ	ENSMUSG00205042156	lncRNA gene	Chr8:63793958-63824230 (-)
JF1/MsJ	ENSUMUG00000041504	lncRNA gene	Chr8:72680067-72710600 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190031727	lncRNA gene	Chr8:64295047-64325319 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010036351	lncRNA gene	Chr8:64144397-64174698 (-)
SPRET/EiJ	ENSMSPG00010041039	lncRNA gene	Chr8:65545649-65575630 (-)
WSB/EiJ	ENSIUOG00005026183	lncRNA gene	Chr8:65078834-65109217 (-)

Homology

• Gene Tree
  Gm33103
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm33103
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  2

• Ensembl
  ENSMUSG00000110594 (Evidence)
• NCBI Gene
  102635877

Representative Sequences			Length	Strain/Species
genomic	102635877	NCBI Gene Model | MGI Sequence Detail	32035	C57BL/6J
transcript	XR_379064	RefSeq | MGI Sequence Detail	1324	C57BL/6J

Other
Accession IDs

MGI:5804844

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm33103:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr81511	Chr8:69445870-69445878 (-)	9,261 bp