Gm33051 Gene Detail

Summary

• Symbol
  Gm33051
• Name
  predicted gene, 33051

• Feature Type
  lncRNA gene
• IDs
  MGI:5592210
  NCBI Gene: 102635804
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr3:28864336-28870332 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592210	lncRNA gene	Chr3:28861354-28870422 (-)
129S1/SvImJ	ENSMUSG00200024923	lncRNA gene	Chr3:25581473-25588253 (-)
A/J	ENSMUSG00195022327	lncRNA gene	Chr3:25694407-25701187 (-)
AKR/J	ENSMUSG00220008887	lncRNA gene	Chr3:25711115-25717910 (-)
BALB/cJ	ENSMUSG00180034134	lncRNA gene	Chr3:25708566-25715346 (-)
C3H/HeJ	ENSMUSG00175029160	lncRNA gene	Chr3:25685308-25692081 (-)
C57BL/6NJ	ENSMUSG00215019441	lncRNA gene	Chr3:25958219-25965003 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003338	antisense lncRNA gene	Chr3:23946659-23953085 (-)
CAST/EiJ	ENSTCUG00005026662	lncRNA gene	Chr3:25550357-25557128 (-)
CBA/J	ENSMUSG00210037596	lncRNA gene	Chr3:25671138-25677911 (-)
DBA/2J	ENSMUSG00185009701	lncRNA gene	Chr3:25931933-25938682 (-)
FVB/NJ	ENSMUSG00205009214	lncRNA gene	Chr3:25253965-25260898 (-)
JF1/MsJ	ENSUMUG00000005989	lncRNA gene	Chr3:25413085-25419739 (-)
LP/J	ENSMUSG00230002130	lncRNA gene	Chr3:27810917-27817697 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225007446	lncRNA gene	Chr3:30445472-30452252 (-)
PWK/PhJ	ENSLUMG00010038413	lncRNA gene	Chr3:25397590-25404246 (-)
SPRET/EiJ	ENSMSPG00010025986	lncRNA gene	Chr3:25801081-25807691 (-)
WSB/EiJ	ENSIUOG00005036798	lncRNA gene	Chr3:25959038-25965860 (-)

Homology

• Gene Tree
  Gm33051
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm33051
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000104444 (Evidence)
• NCBI Gene
  102635804

Representative Sequences			Length	Strain/Species
genomic	102635804	NCBI Gene Model | MGI Sequence Detail	5997	C57BL/6J
transcript	XR_880714	RefSeq | MGI Sequence Detail	719	C57BL/6J

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm33051:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32871	Chr3:28870413-28870424 (-)	-87 bp
Tssr32870	Chr3:28870392-28870403 (-)	-66 bp