Gm33044 Gene Detail

Summary

• Symbol
  Gm33044
• Name
  predicted gene, 33044

• Feature Type
  lncRNA gene
• IDs
  MGI:5592203
  NCBI Gene: 102635796
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:122987513-122987999 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592203	lncRNA gene	Chr5:122973954-122988537 (-)
129S1/SvImJ	ENSMUSG00200029788	lncRNA gene	Chr5:116715443-116715929 (-)
A/J	ENSMUSG00195012967	lncRNA gene	Chr5:116236832-116237318 (-)
AKR/J	ENSMUSG00220047656	lncRNA gene	Chr5:115749071-115749557 (-)
BALB/cJ	ENSMUSG00180041764	lncRNA gene	Chr5:116351581-116352067 (-)
C3H/HeJ	ENSMUSG00175034004	lncRNA gene	Chr5:118368963-118369449 (-)
C57BL/6NJ	ENSMUSG00215044652	lncRNA gene	Chr5:116394786-116395272 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042159	lncRNA gene	Chr5:115658688-115659176 (-)
CBA/J	ENSMUSG00210010951	lncRNA gene	Chr5:117119759-117120245 (-)
DBA/2J	ENSMUSG00185054461	lncRNA gene	Chr5:120170997-120171483 (-)
FVB/NJ	ENSMUSG00205047045	lncRNA gene	Chr5:116025067-116025553 (-)
JF1/MsJ	ENSUMUG00000052274	lncRNA gene	Chr5:123031740-123032228 (-)
LP/J	ENSMUSG00230048025	lncRNA gene	Chr5:124237461-124237947 (-)
NOD/ShiLtJ	ENSMUSG00190047566	lncRNA gene	Chr5:116045413-116045899 (-)
NZO/HlLtJ	ENSMUSG00225017189	lncRNA gene	Chr5:131927781-131928267 (-)
PWK/PhJ	ENSLUMG00010045559	lncRNA gene	Chr5:114931010-114931498 (-)
SPRET/EiJ	ENSMSPG00010047215	lncRNA gene	Chr5:118246173-118246639 (-)
WSB/EiJ	ENSIUOG00005020476	lncRNA gene	Chr5:118735722-118736208 (-)

Homology

• Gene Tree
  Gm33044
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm33044
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000120987 (Evidence)
• NCBI Gene
  102635796

Representative Sequences			Length	Strain/Species
genomic	102635796	NCBI Gene Model | MGI Sequence Detail	487	C57BL/6J
transcript	NR_169045	RefSeq | MGI Sequence Detail	400	ZRU/MplStud

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm33044:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr53155	Chr5:122987935-122987953 (-)	55 bp