Gm33024 Gene Detail

Summary

• Symbol
  Gm33024
• Name
  predicted gene, 33024
• Synonyms
  Gm43918

• Feature Type
  lncRNA gene
• IDs
  MGI:5592183
  NCBI Gene: 102635771
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:83985880-83989103 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592183	lncRNA gene	Chr6:83906436-83989103 (-)
129S1/SvImJ	ENSMUSG00200012923	lncRNA gene	Chr6:80954995-80958214 (-)
A/J	ENSMUSG00195012431	lncRNA gene	Chr6:80633967-80637194 (-)
AKR/J	ENSMUSG00220002279	lncRNA gene	Chr6:79583613-79586836 (-)
BALB/cJ	ENSMUSG00180009961	lncRNA gene	Chr6:81010033-81013262 (-)
C3H/HeJ	ENSMUSG00175039968	lncRNA gene	Chr6:96398655-96401880 (+)
C57BL/6NJ	ENSMUSG00215018238	lncRNA gene	Chr6:81005671-81008895 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003888	antisense lncRNA gene	Chr6:80180666-80183807 (-)
CAST/EiJ	ENSTCUG00005008407	lncRNA gene	Chr6:81007712-81010930 (-)
CBA/J	ENSMUSG00210011537	lncRNA gene	Chr6:80823880-80827105 (-)
DBA/2J	ENSMUSG00185046819	lncRNA gene	Chr6:81371022-81374245 (-)
FVB/NJ	ENSMUSG00205027566	lncRNA gene	Chr6:80051622-80054849 (-)
JF1/MsJ	ENSUMUG00000023878	lncRNA gene	Chr6:80423311-80426597 (-)
LP/J	ENSMUSG00230050751	lncRNA gene	Chr6:82512212-82515431 (-)
NOD/ShiLtJ	ENSMUSG00190001821	lncRNA gene	Chr6:80454688-80457913 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010006485	lncRNA gene	Chr6:79769733-79773002 (-)
SPRET/EiJ	ENSMSPG00010044883	lncRNA gene	Chr6:81905317-81908571 (-)
WSB/EiJ	ENSIUOG00005019467	lncRNA gene	Chr6:81389149-81392374 (-)

Homology

• Gene Tree
  Gm33024
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  3
• Endonuclease-mediated
  1
• Gene trapped
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm33024
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  3

• Ensembl
  ENSMUSG00000107682 (Evidence)
• NCBI Gene
  102635771

Representative Sequences			Length	Strain/Species
genomic	102635771	NCBI Gene Model | MGI Sequence Detail	3224	C57BL/6J
transcript	XR_377790	RefSeq | MGI Sequence Detail	825	C57BL/6J

Other
Accession IDs

MGI:5690310

References

• Summaries
  All 13

  Phenotypes 8
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376

TSS for Gm33024:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61718	Chr6:83987073-83987076 (-)	2,028 bp