Gm32934 Gene Detail

Summary

• Symbol
  Gm32934
• Name
  predicted gene, 32934

• Feature Type
  lncRNA gene
• IDs
  MGI:5592093
  NCBI Gene: 102635648
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:86987767-86994108 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  257 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592093	lncRNA gene	Chr12:86987767-86994158 (-)
129S1/SvImJ	ENSMUSG00200051431	lncRNA gene	Chr12:79008071-79009671 (-)
A/J	ENSMUSG00195035814	lncRNA gene	Chr12:81627825-81629425 (-)
AKR/J	ENSMUSG00220050226	lncRNA gene	Chr12:79423702-79425302 (-)
BALB/cJ	ENSMUSG00180027373	lncRNA gene	Chr12:80665549-80667149 (-)
C3H/HeJ	ENSMUSG00175041995	lncRNA gene	Chr12:83758488-83760088 (-)
C57BL/6NJ	ENSMUSG00215046006	lncRNA gene	Chr12:79971965-79973565 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034898	lncRNA gene	Chr12:79941827-79943425 (-)
CBA/J	ENSMUSG00210045792	lncRNA gene	Chr12:80176942-80178542 (-)
DBA/2J	ENSMUSG00185002640	lncRNA gene	Chr12:82028838-82030438 (-)
FVB/NJ	ENSMUSG00205041726	lncRNA gene	Chr12:79843500-79845100 (-)
JF1/MsJ	ENSUMUG00000048565	lncRNA gene	Chr12:86037094-86038697 (-)
LP/J	ENSMUSG00230045631	lncRNA gene	Chr12:89090981-89092581 (-)
NOD/ShiLtJ	ENSMUSG00190047903	lncRNA gene	Chr12:79239154-79240753 (-)
NZO/HlLtJ	ENSMUSG00225052479	lncRNA gene	Chr12:91128027-91129627 (-)
PWK/PhJ	ENSLUMG00010030674	lncRNA gene	Chr12:80047249-80048851 (-)
SPRET/EiJ	ENSMSPG00010001118	lncRNA gene	Chr12:81860157-81861757 (-)
WSB/EiJ	ENSIUOG00005044933	lncRNA gene	Chr12:79896458-79898058 (-)

Homology

• Gene Tree
  Gm32934
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  29
• Chemically induced (other)
  1
• Gene trapped
  28
• Genomic Mutations
  1 involving Gm32934
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000120035 (Evidence)
• NCBI Gene
  102635648

Representative Sequences			Length	Strain/Species
genomic	102635648	NCBI Gene Model | MGI Sequence Detail	6342	C57BL/6J
transcript	NR_175333	RefSeq | MGI Sequence Detail	882	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm32934:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117143	Chr12:86994102-86994109 (-)	2 bp