Gm32892 Pseudogene Detail

Summary

• Symbol
  Gm32892
• Name
  predicted gene, 32892

• Feature Type
  pseudogene
• IDs
  MGI:5592051
  NCBI Gene: 102635601
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:23092460-23092975 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592051	pseudogene	Chr17:23085866-23092981 (+)
129S1/SvImJ	ENSMUSG00200039061	pseudogene	Chr17:18637244-18637759 (+)
A/J	ENSMUSG00195038795	pseudogene	Chr17:19647938-19648453 (+)
AKR/J	ENSMUSG00220029105	pseudogene	Chr17:18657355-18657870 (+)
BALB/cJ	ENSMUSG00180019397	pseudogene	Chr17:18938039-18938554 (+)
C3H/HeJ	ENSMUSG00175045778	pseudogene	Chr17:18603453-18603968 (+)
C57BL/6NJ	ENSMUSG00215043899	pseudogene	Chr17:18585217-18585732 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023591	pseudogene	Chr17:19278338-19278853 (+)
CBA/J	ENSMUSG00210045201	pseudogene	Chr17:18365109-18365624 (+)
DBA/2J	ENSMUSG00185055186	pseudogene	Chr17:20744316-20744831 (+)
FVB/NJ	ENSMUSG00205039210	pseudogene	Chr17:19078565-19079080 (+)
JF1/MsJ	ENSUMUG00000057772	pseudogene	Chr17:20190110-20190625 (+)
LP/J	ENSMUSG00230055135	pseudogene	Chr17:22142228-22142743 (+)
NOD/ShiLtJ	ENSMUSG00190042008	pseudogene	Chr17:18575390-18575905 (+)
NZO/HlLtJ	ENSMUSG00225054808	pseudogene	Chr17:24065304-24065819 (+)
PWK/PhJ	ENSLUMG00010021638	pseudogene	Chr17:18172385-18172900 (+)
SPRET/EiJ	ENSMSPG00010041734	pseudogene	Chr17:19614384-19614894 (+)
WSB/EiJ	ENSIUOG00005042217	pseudogene	Chr17:19371208-19371723 (+)

Homology

• Gene Tree
  Gm32892
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm32892
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117002 (Evidence)
• NCBI Gene
  102635601

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117002	Ensembl Gene Model | MGI Sequence Detail	516	C57BL/6J
transcript	ENSMUST00000233007	Ensembl | MGI Sequence Detail	516	Not Applicable

References

• Summaries
  All 19

  Phenotypes 16
• Earliest
  J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
• Latest
  J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964