Gm32886 Pseudogene Detail

Summary

• Symbol
  Gm32886
• Name
  predicted gene, 32886

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5592045
  NCBI Gene: 102635595
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:83142149-83142298 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592045	pseudogene	Chr15:83142018-83142520 (-)
129S1/SvImJ	ENSMUSG00200053850	pseudogene	Chr15:80267685-80267834 (-)
A/J	ENSMUSG00195052041	pseudogene	Chr15:80193935-80194084 (-)
AKR/J	ENSMUSG00220053265	pseudogene	Chr15:80237095-80237244 (-)
BALB/cJ	ENSMUSG00180054008	pseudogene	Chr15:80070859-80071008 (-)
C3H/HeJ	ENSMUSG00175053449	pseudogene	Chr15:80381791-80381940 (-)
C57BL/6NJ	ENSMUSG00215052905	pseudogene	Chr15:80159797-80159946 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048334	pseudogene	Chr15:79654938-79655087 (-)
CBA/J	ENSMUSG00210049302	pseudogene	Chr15:80156780-80156929 (-)
DBA/2J	ENSMUSG00185051567	pseudogene	Chr15:80187245-80187394 (-)
FVB/NJ	ENSMUSG00205052586	pseudogene	Chr15:79929771-79929920 (-)
JF1/MsJ	ENSUMUG00000056699	pseudogene	Chr15:79714180-79714329 (-)
LP/J	ENSMUSG00230045694	pseudogene	Chr15:83508042-83508191 (-)
NOD/ShiLtJ	ENSMUSG00190053961	pseudogene	Chr15:80173929-80174078 (-)
NZO/HlLtJ	ENSMUSG00225050171	pseudogene	Chr15:83841146-83841295 (-)
PWK/PhJ	ENSLUMG00010052713	pseudogene	Chr15:79917924-79918073 (-)
SPRET/EiJ	ENSMSPG00010050929	pseudogene	Chr15:81582580-81582729 (-)
WSB/EiJ	ENSIUOG00005049954	pseudogene	Chr15:80256651-80256800 (-)

Homology

• Gene Tree
  Gm32886
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm32886
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000116416 (Evidence)
• NCBI Gene
  102635595

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116416	Ensembl Gene Model | MGI Sequence Detail	150	C57BL/6J
transcript	ENSMUST00000230161	Ensembl | MGI Sequence Detail	150	Not Applicable
polypeptide	XP_006521708	RefSeq | MGI Sequence Detail	69	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;