Gm32880 Gene Detail

Summary

• Symbol
  Gm32880
• Name
  predicted gene, 32880

• Feature Type
  lncRNA gene
• IDs
  MGI:5592039
  NCBI Gene: 102635587
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:95873091-95890146 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  757 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592039	lncRNA gene	Chr13:95873091-95890146 (+)
129S1/SvImJ	ENSMUSG00200009223	lncRNA gene	Chr13:90375428-90392054 (+)
A/J	ENSMUSG00195029523	lncRNA gene	Chr13:90874927-90891555 (+)
AKR/J	ENSMUSG00220013996	lncRNA gene	Chr13:89328416-89344996 (+)
BALB/cJ	ENSMUSG00180037731	lncRNA gene	Chr13:91409120-91425704 (+)
C3H/HeJ	ENSMUSG00175018293	lncRNA gene	Chr13:91572583-91589163 (+)
C57BL/6NJ	ENSMUSG00215034315	lncRNA gene	Chr13:91474209-91491274 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009908	lncRNA gene	Chr13:90673988-90690701 (+)
CBA/J	ENSMUSG00210012109	lncRNA gene	Chr13:90894543-90911128 (+)
DBA/2J	ENSMUSG00185020190	lncRNA gene	Chr13:94555245-94571830 (+)
FVB/NJ	ENSMUSG00205008707	lncRNA gene	Chr13:90356446-90373030 (+)
JF1/MsJ	ENSUMUG00000028008	lncRNA gene	Chr13:94265805-94282840 (+)
LP/J	ENSMUSG00230037980	lncRNA gene	Chr13:104572742-104589781 (+)
NOD/ShiLtJ	ENSMUSG00190044915	lncRNA gene	Chr13:91255029-91272081 (+)
NZO/HlLtJ	ENSMUSG00225034479	lncRNA gene	Chr13:97086568-97103148 (+)
PWK/PhJ	ENSLUMG00010011929	lncRNA gene	Chr13:90359747-90376635 (+)
SPRET/EiJ	ENSMSPG00010010195	lncRNA gene	Chr13:91626627-91643577 (+)
WSB/EiJ	ENSIUOG00005032443	lncRNA gene	Chr13:90278154-90294738 (+)

Homology

• Gene Tree
  Gm32880
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000118436 (Evidence)
• NCBI Gene
  102635587

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118436	Ensembl Gene Model | MGI Sequence Detail	17056	C57BL/6J
transcript	ENSMUST00000238548	Ensembl | MGI Sequence Detail	969	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;