Gm32877 Gene Detail

Summary

• Symbol
  Gm32877
• Name
  predicted gene, 32877
• Synonyms
  Gm43641

• Feature Type
  lncRNA gene
• IDs
  MGI:5592036
  NCBI Gene: 102635583
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:11340145-11390275 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592036	lncRNA gene	Chr5:11313141-11390324 (-)
129S1/SvImJ	ENSMUSG00200003238	lncRNA gene	Chr5:8075455-8094948 (+)
A/J	ENSMUSG00195012674	lncRNA gene	Chr5:7683259-7702772 (-)
AKR/J	ENSMUSG00220002251	lncRNA gene	Chr5:7804566-7823788 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001845	lncRNA gene	Chr5:7714219-7714306 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185029591	lncRNA gene	Chr5:8375011-8394521 (-)
DBA/2J	ENSMUSG00185029604	lncRNA gene	Chr5:8804055-8823539 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000004230	lncRNA gene	Chr5:8998098-9015923 (-)
LP/J	ENSMUSG00230003739	lncRNA gene	Chr5:12380941-12400426 (-)
LP/J	ENSMUSG00230003897	lncRNA gene	Chr5:12949589-12969077 (-)
LP/J	ENSMUSG00230003896	lncRNA gene	Chr5:12865645-12885149 (-)
NOD/ShiLtJ	ENSMUSG00190012939	lncRNA gene	Chr5:7438096-7438183 (-)
NZO/HlLtJ	ENSMUSG00225009600	lncRNA gene	Chr5:16626460-16645558 (-)
NZO/HlLtJ	ENSMUSG00225009587	lncRNA gene	Chr5:16542518-16562014 (-)
NZO/HlLtJ	ENSMUSG00225009409	lncRNA gene	Chr5:16057727-16077197 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010005161	lncRNA gene	Chr5:7994365-7994452 (-)
WSB/EiJ	ENSIUOG00005027229	lncRNA gene	Chr5:7699683-7719148 (+)

Homology

• Gene Tree
  Gm32877
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  5

• Ensembl
  ENSMUSG00000106148 (Evidence)
• NCBI Gene
  102635583

Representative Sequences			Length	Strain/Species
genomic	102635583	NCBI Gene Model | MGI Sequence Detail	50131	C57BL/6J
transcript	XR_001784784	RefSeq | MGI Sequence Detail	1696	C57BL/6J

Other
Accession IDs

MGI:5663778

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;