Gm32842 Pseudogene Detail

Summary

• Symbol
  Gm32842
• Name
  predicted gene, 32842

• Feature Type
  pseudogene
• IDs
  MGI:5592001
  NCBI Gene: 102635532
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:48723283-48724020 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5592001	pseudogene	Chr8:48723283-48724020 (-)
129S1/SvImJ	ENSMUSG00200006823	pseudogene	Chr8:43806909-43807646 (-)
A/J	ENSMUSG00195004237	pseudogene	Chr8:44341896-44342633 (-)
AKR/J	ENSMUSG00220004723	pseudogene	Chr8:44131447-44132184 (-)
BALB/cJ	ENSMUSG00180003000	pseudogene	Chr8:43882839-43883576 (-)
C3H/HeJ	ENSMUSG00175005362	pseudogene	Chr8:44004367-44005104 (-)
C57BL/6NJ	ENSMUSG00215012246	pseudogene	Chr8:43813955-43814692 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020393	pseudogene	Chr8:43824416-43825069 (-)
CBA/J	ENSMUSG00210019213	pseudogene	Chr8:43877693-43878430 (-)
DBA/2J	ENSMUSG00185006180	pseudogene	Chr8:49768363-49769100 (-)
FVB/NJ	ENSMUSG00205002911	pseudogene	Chr8:43007430-43008167 (-)
JF1/MsJ	ENSUMUG00000006389	pseudogene	Chr8:51364653-51365306 (-)
LP/J	ENSMUSG00230017983	pseudogene	Chr8:53416422-53417159 (-)
NOD/ShiLtJ	ENSMUSG00190006392	pseudogene	Chr8:43919938-43920675 (-)
NZO/HlLtJ	ENSMUSG00225012125	pseudogene	Chr8:57005019-57005756 (-)
PWK/PhJ	ENSLUMG00010009828	pseudogene	Chr8:43654967-43655620 (-)
SPRET/EiJ	ENSMSPG00010006292	pseudogene	Chr8:44528897-44529634 (-)
WSB/EiJ	ENSIUOG00005002653	pseudogene	Chr8:44739642-44740295 (-)

Homology

• Gene Tree
  Gm32842
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm32842
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000110480 (Evidence)
• NCBI Gene
  102635532

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110480	Ensembl Gene Model | MGI Sequence Detail	738	C57BL/6J
transcript	ENSMUST00000212653	Ensembl | MGI Sequence Detail	738	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;