Gm32718 Gene Detail

Summary

• Symbol
  Gm32718
• Name
  predicted gene, 32718

• Feature Type
  lncRNA gene
• IDs
  MGI:5591877
  NCBI Gene: 102635359
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr19:56732768-56750077 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  593 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591877	lncRNA gene	Chr19:56732768-56754389 (+)
129S1/SvImJ	ENSMUSG00200014941	lncRNA gene	Chr19:53439494-53452971 (+)
A/J	ENSMUSG00195002589	lncRNA gene	Chr19:53610680-53624166 (+)
AKR/J	ENSMUSG00220017901	lncRNA gene	Chr19:53362186-53375661 (+)
BALB/cJ	ENSMUSG00180019388	lncRNA gene	Chr19:53849770-53863255 (+)
C3H/HeJ	ENSMUSG00175022494	lncRNA gene	Chr19:53385645-53399121 (+)
C57BL/6NJ	ENSMUSG00215029219	lncRNA gene	Chr19:53469809-53483289 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015538	lncRNA gene	Chr19:53012954-53025720 (+)
CBA/J	ENSMUSG00210021504	lncRNA gene	Chr19:53464977-53478448 (+)
DBA/2J	ENSMUSG00185028280	lncRNA gene	Chr19:53963821-53977289 (+)
FVB/NJ	ENSMUSG00205003551	lncRNA gene	Chr19:52870594-52884070 (+)
JF1/MsJ	ENSUMUG00000039205	lncRNA gene	Chr19:54149122-54162373 (+)
LP/J	ENSMUSG00230027825	lncRNA gene	Chr19:54720968-54734443 (+)
NOD/ShiLtJ	ENSMUSG00190014085	lncRNA gene	Chr19:53337989-53351459 (+)
NZO/HlLtJ	ENSMUSG00225025416	lncRNA gene	Chr19:58326661-58340136 (+)
PWK/PhJ	ENSLUMG00010018748	lncRNA gene	Chr19:53205917-53218717 (+)
SPRET/EiJ	ENSMSPG00010003386	lncRNA gene	Chr19:53068910-53082149 (+)
WSB/EiJ	ENSIUOG00005024939	lncRNA gene	Chr19:52822483-52835972 (+)

Homology

• Gene Tree
  Gm32718
  

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  2

• Ensembl
  ENSMUSG00000120396 (Evidence)
• NCBI Gene
  102635359

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120396	Ensembl Gene Model | MGI Sequence Detail	17310	C57BL/6J
transcript	ENSMUST00000294128	Ensembl | MGI Sequence Detail	2962	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm32718:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157211	Chr19:56732882-56732899 (+)	123 bp
Tssr157212	Chr19:56733949-56733957 (+)	1,185 bp
Tssr157213	Chr19:56746627-56746641 (+)	13,866 bp
Tssr157214	Chr19:56746699-56746711 (+)	13,937 bp