Gm32655 Gene Detail

Summary

• Symbol
  Gm32655
• Name
  predicted gene, 32655

• Feature Type
  lncRNA gene
• IDs
  MGI:5591814
  NCBI Gene: 102635272
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr17:36280644-36283433 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591814	lncRNA gene	Chr17:36280466-36283516 (+)
129S1/SvImJ	ENSMUSG00200052102	lncRNA gene	Chr17:31906045-31908823 (+)
A/J	ENSMUSG00195047718	lncRNA gene	Chr17:32968077-32970863 (+)
AKR/J	ENSMUSG00220052201	lncRNA gene	Chr17:31769655-31772433 (+)
BALB/cJ	ENSMUSG00180045812	lncRNA gene	Chr17:32337547-32340326 (+)
C3H/HeJ	ENSMUSG00175044174	lncRNA gene	Chr17:31655491-31658269 (+)
C57BL/6NJ	ENSMUSG00215053176	lncRNA gene	Chr17:31731300-31734080 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052333	lncRNA gene	Chr17:32797447-32800223 (+)
CBA/J	ENSMUSG00210052699	lncRNA gene	Chr17:31477526-31480304 (+)
DBA/2J	ENSMUSG00185055823	lncRNA gene	Chr17:34356697-34359476 (+)
FVB/NJ	ENSMUSG00205053786	lncRNA gene	Chr17:32024275-32027061 (+)
JF1/MsJ	ENSUMUG00000057539	lncRNA gene	Chr17:33313333-33320467 (+)
LP/J	ENSMUSG00230054822	lncRNA gene	Chr17:35394719-35397497 (+)
NOD/ShiLtJ	ENSMUSG00190053716	lncRNA gene	Chr17:31643383-31646169 (+)
NZO/HlLtJ	ENSMUSG00225054969	lncRNA gene	Chr17:37481481-37484258 (+)
PWK/PhJ	ENSLUMG00010045184	lncRNA gene	Chr17:31276046-31278830 (+)
SPRET/EiJ	ENSMSPG00010050045	lncRNA gene	Chr17:32486931-32493348 (+)
WSB/EiJ	ENSIUOG00005051886	lncRNA gene	Chr17:32460112-32463105 (+)

Homology

• Gene Tree
  Gm32655
  

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  2

• Ensembl
  ENSMUSG00000120154 (Evidence)
• NCBI Gene
  102635272

Representative Sequences			Length	Strain/Species
genomic	102635272	NCBI Gene Model | MGI Sequence Detail	2790	C57BL/6J
transcript	NR_175823	RefSeq | MGI Sequence Detail	1488	ZRU/MplStud

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm32655:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144482	Chr17:36280777-36280858 (+)	174 bp
Tssr144483	Chr17:36280948-36280960 (+)	310 bp