Gm32652 Gene Detail

Summary

• Symbol
  Gm32652
• Name
  predicted gene, 32652

• Feature Type
  lncRNA gene
• IDs
  MGI:5591811
  NCBI Gene: 102635269
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:164686255-164727549 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1534 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5591811	lncRNA gene	Chr1:164623090-164727558 (-)
129S1/SvImJ	ENSMUSG00200006799	lncRNA gene	Chr1:162173431-162199768 (-)
A/J	ENSMUSG00195023214	lncRNA gene	Chr1:161490028-161516390 (-)
AKR/J	ENSMUSG00220014139	lncRNA gene	Chr1:161278210-161304553 (-)
BALB/cJ	ENSMUSG00180041634	lncRNA gene	Chr1:161739445-161765786 (-)
C3H/HeJ	ENSMUSG00175044026	lncRNA gene	Chr1:161835252-161861584 (-)
C57BL/6NJ	ENSMUSG00215042009	lncRNA gene	Chr1:161707316-161733652 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021768	lncRNA gene	Chr1:160304907-160331676 (-)
CBA/J	ENSMUSG00210021269	lncRNA gene	Chr1:161709835-161736154 (-)
DBA/2J	ENSMUSG00185011984	lncRNA gene	Chr1:165951128-165977347 (-)
FVB/NJ	ENSMUSG00205010731	lncRNA gene	Chr1:160770014-160796269 (-)
JF1/MsJ	ENSUMUG00000012862	lncRNA gene	Chr1:165101917-165128125 (-)
LP/J	ENSMUSG00230026395	lncRNA gene	Chr1:165567623-165593952 (-)
NOD/ShiLtJ	ENSMUSG00190045086	lncRNA gene	Chr1:161539404-161565748 (-)
NZO/HlLtJ	ENSMUSG00225004660	lncRNA gene	Chr1:169161050-169187384 (-)
PWK/PhJ	ENSLUMG00010046442	lncRNA gene	Chr1:160479150-160505893 (-)
SPRET/EiJ	ENSMSPG00010044093	lncRNA gene	Chr1:163980985-164008732 (-)
WSB/EiJ	ENSIUOG00005015601	lncRNA gene	Chr1:161042526-161068858 (-)

Homology

• Gene Tree
  Gm32652
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm32652
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  71
• RefSeq
  7

• Ensembl
  ENSMUSG00000120413 (Evidence)
• NCBI Gene
  102635269

Representative Sequences			Length	Strain/Species
genomic	102635269	NCBI Gene Model | MGI Sequence Detail	41295	C57BL/6J
transcript	XR_004936670	RefSeq | MGI Sequence Detail	3277	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm32652:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr14753	Chr1:164727149-164727165 (-)	392 bp
Tssr14752	Chr1:164712549-164712559 (-)	14,995 bp